RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RNF38Q9H0F5 515 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 IQCF5A8MTL0 148 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 TMEM189-UBE2V1I3L0A0 370 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 ZNF701M0R085 212 aaPredicted RBP16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 PRAMEF11O60813 436 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 BMP1P13497 986 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 BMXP51813 675 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 ZNF177Q13360 481 aaPredicted RBP16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 LAPTM5Q13571 262 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 GLYATQ6IB77 296 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 NPAS4Q8IUM7 802 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 PIANPQ8IYJ0 282 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 TM6SF2Q9BZW4 377 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 CCDC68Q9H2F9 335 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 ARMC7Q9H6L4 198 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 PKD2L2Q9NZM6 624 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 PCDHGA11Q9Y5H2 935 aa16.05■□□□□ 0.16
NKX3-1-201ENST00000380871 SYNCRIPO60506 623 aaKnown RBP16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ALBP02768 609 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 FCGR1AP12314 374 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 FOXM1Q08050 763 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 NFATC3Q12968 1075 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 BFSP2Q13515 415 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 PTPRNQ16849 979 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 PARP15Q460N3 678 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 C6orf136Q5SQH8 315 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ANKS3Q6ZW76 656 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 TMBIM1Q969X1 311 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 PLEKHA8Q96JA3 519 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ADNPQ9H2P0 1102 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 TRIM17Q9Y577 477 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 INHBBP09529 407 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 CTPS1P17812 591 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 HLCSP50747 726 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 CCNYL2Q5T2Q4 361 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 TAS2R42Q7RTR8 314 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 GLT6D1Q7Z4J2 308 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 STK32CQ86UX6 486 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 PAPD5Q8NDF8 572 aaKnown RBP16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 GPR150Q8NGU9 434 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 BRSK1Q8TDC3 778 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 EEF1AKMT1Q8WVE0 214 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 FAM210AQ96ND0 272 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 CSF3RQ99062 836 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 DERL2Q9GZP9 239 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 SMURF2Q9HAU4 748 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 SCUBE2Q9NQ36 999 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 TAS2R13Q9NYV9 303 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 LEF1Q9UJU2 399 aaPredicted RBP16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ESRRBO95718 433 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 IMPDH2P12268 514 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ITGB6P18564 788 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 PAX3P23760 479 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ARSFP54793 590 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 C21orf59P57076 290 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 NRG1Q02297 640 aaPredicted RBP16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 ZRANB3Q5FWF4 1079 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 HECTD3Q5T447 861 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 PSAPL1Q6NUJ1 521 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 LETMD1Q6P1Q0 360 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 Q6ZSR9 355 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 SNX19Q92543 992 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 LHPPQ9H008 270 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 TBC1D23Q9NUY8 699 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 COMMD10Q9Y6G5 202 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 MYO7AQ13402 2215 aa16.04■□□□□ 0.16
NKX3-1-201ENST00000380871 H7C4K7 107 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 PRRG1O14668 218 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 AXIN1O15169 862 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 NOBOXO60393 691 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 NDUFS3O75489 264 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 HOXD9P28356 352 aaPredicted RBP16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 NKX3-2P78367 333 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 RAD51Q06609 339 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 TGFBIQ15582 683 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 IMPG1Q17R60 797 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 TYSND1Q2T9J0 566 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 COQ5Q5HYK3 327 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 ATXN7L2Q5T6C5 722 aaPredicted RBP16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 XAF1Q6GPH4 301 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 CLEC4FQ8N1N0 589 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 SLC15A4Q8N697 577 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 GOLM1Q8NBJ4 401 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 MDGA1Q8NFP4 955 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 ZNF420Q8TAQ5 688 aaPredicted RBP16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 BPIFB1Q8TDL5 484 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 NSMCE2Q96MF7 247 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 ACTL8Q9H568 366 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 EXD2Q9NVH0 621 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 SUN2Q9UH99 717 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 ZNF639Q9UID6 485 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 IGLV3-10A0A075B6K4 115 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 LCHNA4D1U4 455 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 DRGXA6NNA5 263 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 TSPAN12O95859 305 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 FGF1P05230 155 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms