RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 WRAP53Q9BUR4 548 aaKnown RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 ZDHHC4Q9NPG8 344 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 SUN2Q9UH99 717 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 PTBP2Q9UKA9 531 aaKnown RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 TIMM22Q9Y584 194 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 TNPO3Q9Y5L0 923 aaKnown RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 A0A088AWK7 358 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 ITGAXP20702 1163 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 ITGB7P26010 798 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 ZNF284Q2VY69 593 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 KHDC1Q4VXA5 237 aaKnown RBP19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 FBXL19Q6PCT2 694 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 UCMAQ8WVF2 138 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 WDR60Q8WVS4 1066 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 AKTIPQ9H8T0 292 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 TAPBPO15533 448 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 SPINT1O43278 529 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 CRCPO75575 148 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 CCND1P24385 295 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 HSPA14Q0VDF9 509 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 KPNB1Q14974 876 aaKnown RBP19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 ZNF648Q5T619 568 aaPredicted RBP19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 PARM1Q6UWI2 310 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 DDIASQ8IXT1 998 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 FGF14Q92915 247 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 CHFRQ96EP1 664 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 FBRSL1Q9HCM7 1045 aaKnown RBP19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 CD248Q9HCU0 757 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 HCN2Q9UL51 889 aa19.52■□□□□ 0.72
PDLIM5-205ENST00000380180 CFAP99D6REC4 459 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 PLK4O00444 970 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 AIM2O14862 343 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 GIPC1O14908 333 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 PEX11AO75192 247 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 LINC00032P0C843 101 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 LAMP2P13473 410 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 VCLP18206 1134 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 MSH3P20585 1137 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 IL12RB1P42701 662 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 ADAM15Q13444 863 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 HERC3Q15034 1050 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 DEFB107AQ8IZN7 70 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 DDHD1Q8NEL9 900 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 OR52B6Q8NGF0 335 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 MAGEC3Q8TD91 643 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 BTN2A2Q8WVV5 523 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 AP2M1Q96CW1 435 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 ERLEC1Q96DZ1 483 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 EGFL8Q99944 293 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 NOL11Q9H8H0 719 aaKnown RBP19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 CLEC1BQ9P126 229 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 SLC7A8Q9UHI5 535 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 BTRCQ9Y297 605 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 ZFC3H1O60293 1989 aaKnown RBP19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 WNT9AO14904 365 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 SGTAO43765 313 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 KAT7O95251 611 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 UROSP10746 265 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 ENO3P13929 434 aaPredicted RBP19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 HSPA7P48741 367 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 SQLEQ14534 574 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 CES5AQ6NT32 575 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 GPRIN3Q6ZVF9 776 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 GOLGA7Q7Z5G4 137 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 HMGCLL1Q8TB92 370 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 SUSD6Q92537 303 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 TIFAQ96CG3 184 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 ZNF382Q96SR6 550 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 ACOX2Q99424 681 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 RPP25Q9BUL9 199 aaKnown RBP19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 S1PR5Q9H228 398 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 RDH14Q9HBH5 336 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 L3MBTL1Q9Y468 752 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 SZT2Q5T011 3432 aa19.51■□□□□ 0.71
PDLIM5-205ENST00000380180 H0Y858 1186 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 PSMD11O00231 422 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 EIF3FO00303 357 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 OR4F21O95013 312 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 GDI1P31150 447 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 DLX2Q07687 328 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 GTF2H2Q13888 395 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 BOP1Q14137 746 aaKnown RBP19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 GBX1Q14549 363 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 SULT1C3Q6IMI6 304 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 GTF2H2CQ6P1K8 395 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 NRSN1Q8IZ57 195 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 DCBLD1Q8N8Z6 715 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 ELSPBP1Q96BH3 223 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 RHBDF1Q96CC6 855 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 COQ10AQ96MF6 247 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 CDK15Q96Q40 435 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 MRGBPQ9NV56 204 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 THAP10Q9P2Z0 257 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 GIMAP2Q9UG22 337 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 COQ6Q9Y2Z9 468 aa19.5■□□□□ 0.71
PDLIM5-205ENST00000380180 OR2AG2A6NM03 316 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 CHUKO15111 745 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 EPHX1P07099 455 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 ALDOCP09972 364 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 ADRB3P13945 408 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms