RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 GPR3P46089 330 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 DPTQ07507 201 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 CDH17Q12864 832 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 UAP1Q16222 522 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 CLPPQ16740 277 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 RANBP10Q6VN20 620 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 EXD3Q8N9H8 876 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 AGBL5Q8NDL9 886 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 SIGLEC10Q96LC7 697 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TAAR9Q96RI9 348 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TBL1YQ9BQ87 522 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 RIOK2Q9BVS4 552 aaKnown RBP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 ARNT2Q9HBZ2 717 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TEX264Q9Y6I9 313 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 IGHV1OR21-1A0A087WYE8 117 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 A0A0J9YYE9 177 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 PPM1DO15297 605 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 RIPK2O43353 540 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 DUX1O43812 170 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 SNX2O60749 519 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TTC4O95801 387 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TRBC1P01850 177 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 SLC4A1P02730 911 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 ABHD2P08910 425 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 ZNF30P17039 623 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 CSF2RBP32927 897 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 GRIA1P42261 906 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 NPY2RP49146 381 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 LIMK2P53671 638 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 WNT3AP56704 352 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 NFKB2Q00653 900 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 KCNC4Q03721 635 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TRA2AQ13595 282 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 LINC00303Q3SY05 128 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 BBS9Q3SYG4 887 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 ZNF574Q6ZN55 896 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 TECPR1Q7Z6L1 1165 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 ZBED8Q8IZ13 594 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 IPMKQ8NFU5 416 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 OR4D9Q8NGE8 314 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 OR10G6Q8NH81 332 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 UBLCP1Q8WVY7 318 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-202ENST00000378572 PMEPA1Q969W9 287 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 AGAP2Q99490 1192 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 NAT9Q9BTE0 207 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 EPB41L4BQ9H329 900 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 SLC39A1Q9NY26 324 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 NINJ2Q9NZG7 142 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 UBP1Q9NZI7 540 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 PRKAB1Q9Y478 270 aa13.56□□□□□ -0.24
PRPF18-202ENST00000378572 ASH1LQ9NR48 2969 aaKnown RBP13.55□□□□□ -0.24
PRPF18-202ENST00000378572 C1orf232A0A0U1RR37 186 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 LOC285095A0A1B0GVY8 99 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 EFCAB7A8K855 629 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 A8MU76 341 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 PMPCBO75439 489 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 NUDT17P0C025 328 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 FGF3P11487 239 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-202ENST00000378572 STC1P52823 247 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 NFATC2Q13469 925 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 SPARCL1Q14515 664 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 IHHQ14623 411 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 NR1D2Q14995 579 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 ALS2CLQ60I27 953 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 ZNF765Q7L2R6 523 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 CHST15Q7LFX5 561 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-202ENST00000378572 IQCKQ8N0W5 287 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 OR52K1Q8NGK4 314 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 SLC37A2Q8TED4 501 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 PYROXD1Q8WU10 500 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 FICDQ9BVA6 458 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 TDRD1Q9BXT4 1180 aaKnown RBP13.55□□□□□ -0.24
PRPF18-202ENST00000378572 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 TMEM9Q9P0T7 183 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 KCNK6Q9Y257 313 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 ST14Q9Y5Y6 855 aa13.55□□□□□ -0.24
PRPF18-202ENST00000378572 AVILO75366 819 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 SPAG6O75602 509 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 CLDN7O95471 211 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 SOD1P00441 154 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 GSTA2P09210 222 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 THRAP10827 490 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 ACP5P13686 325 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 WT1P19544 449 aaPredicted RBP13.54□□□□□ -0.24
PRPF18-202ENST00000378572 HLA-DPA1P20036 260 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 ELK3P41970 407 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 GPLD1P80108 840 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 PTSQ03393 145 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 LRP8Q14114 963 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 FASTKD3Q14CZ7 662 aaKnown RBP13.54□□□□□ -0.24
PRPF18-202ENST00000378572 TBR1Q16650 682 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 KYNUQ16719 465 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 PYCR3Q53H96 274 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 DENND5AQ6IQ26 1287 aa13.54□□□□□ -0.24
PRPF18-202ENST00000378572 AGGF1Q8N302 714 aaeCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms