RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SLC6A2P23975 617 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CTSKP43235 329 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TUFMP49411 452 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ARSFP54793 590 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 OR2B6P58173 313 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 RPS7P62081 194 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 GRIK2Q13002 908 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TAZQ16635 292 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ITIH5Q86UX2 942 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SLC22A16Q86VW1 577 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 FBXL8Q96CD0 374 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PCED1BQ96HM7 432 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 COPS4Q9BT78 406 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TRIM39Q9HCM9 518 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PCDH12Q9NPG4 1184 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PRDM8Q9NQV8 689 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 RASSF1Q9NS23 344 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 RNF19AQ9NV58 838 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 C1orf109Q9NX04 203 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 OGDHLQ9ULD0 1010 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 LOXHD1Q8IVV2 1947 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PIPSLA2A3N6 862 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 C9JVG2 144 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TSPAN3O60637 253 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PGRP06401 933 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 GSTM2P28161 218 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 STAT5AP42229 794 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SP2Q02086 613 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 GPR162Q16538 588 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CPTPQ5TA50 214 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 C11orf74Q86VG3 221 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ZC3H7AQ8IWR0 971 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SLC30A8Q8IWU4 369 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF599Q96NL3 588 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PCDHGA7Q9Y5G6 932 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SOCS2O14508 198 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 MSI1O43347 362 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 EEDO75530 441 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 NR4A1P22736 598 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 VARSP26640 1264 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 STT3AP46977 705 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 EPHB3P54753 998 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 POLR2LP62875 67 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 GHRHRQ02643 423 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CYP2A13Q16696 494 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 GCNT6Q5T4J0 391 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 XKR5Q6UX68 686 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 LDB1Q86U70 411 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 OR8J3Q8NGG0 315 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 MZB1Q8WU39 189 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 MYO19Q96H55 970 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SLC39A3Q9BRY0 314 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SEZ6LQ9BYH1 1024 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TOR3AQ9H497 397 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ATP13A3Q9H7F0 1226 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 FAM105AQ9NUU6 356 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM45AQ9NWC5 275 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 RIMS3Q9UJD0 308 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 MOSPD1Q9UJG1 213 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CFL2Q9Y281 166 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SYNDIG1LA6NDD5 238 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 YJEFN3A6XGL0 299 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 PSMA1P25786 263 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 FMO3P31513 532 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CPOXP36551 454 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CHRNA4P43681 627 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TGM3Q08188 693 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 RIPPLY1Q0D2K3 151 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SMARCB1Q12824 385 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SEMA3AQ14563 771 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TIGD6Q17RP2 521 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 XKR6Q5GH73 641 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 NAPRTQ6XQN6 538 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 CAMKK1Q8N5S9 505 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 MRPS31Q92665 395 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 C8orf48Q96LL4 319 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF641Q96N77 438 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 FEM1AQ9BSK4 669 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 TRPC4Q9UBN4 977 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 ATP6V1HQ9UI12 483 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 SNX10Q9Y5X0 201 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 KRT87PA6NCN2 255 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PER2O15055 1255 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CLDN11O75508 207 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ECI2O75521 394 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ENDOD1O94919 500 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ALDH2P05091 517 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PIRTP0C851 137 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 NR2F6P10588 404 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CDK4P11802 303 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 AKR1A1P14550 325 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ABRQ12979 859 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SYPL2Q5VXT5 272 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 DET1Q7L5Y6 550 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CDK20Q8IZL9 346 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms