RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 R3HDM2Q9Y2K5 976 aaKnown RBP16.81■□□□□ 0.28
USP11-202ENST00000377078 KCTD3Q9Y597 815 aa16.81■□□□□ 0.28
USP11-202ENST00000377078 PCDHGA4Q9Y5G9 962 aa16.81■□□□□ 0.28
USP11-202ENST00000377078 ERI2A8K979 691 aaKnown RBP16.8■□□□□ 0.28
USP11-202ENST00000377078 LDB2O43679 373 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 RAD1O60671 282 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 METTL18O95568 372 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 PRB1P04280 392 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 ITGB2P05107 769 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 MAP4P27816 1152 aaKnown RBP16.8■□□□□ 0.28
USP11-202ENST00000377078 MC4RP32245 332 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 LMAN1P49257 510 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 XIAPP98170 497 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 KRT33BQ14525 404 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 RPS6KA1Q15418 735 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 KCTD11Q693B1 232 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 IRGCQ6NXR0 463 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 XKR5Q6UX68 686 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 NLGN4XQ8N0W4 816 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 NLGN4YQ8NFZ3 816 aaPredicted RBP16.8■□□□□ 0.28
USP11-202ENST00000377078 ZFPM2Q8WW38 1151 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 NKD1Q969G9 470 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 PMEPA1Q969W9 287 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 RTP4Q96DX8 246 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 DNAJC1Q96KC8 554 aaKnown RBP16.8■□□□□ 0.28
USP11-202ENST00000377078 LINC00615Q96LM1 132 aaPredicted RBP16.8■□□□□ 0.28
USP11-202ENST00000377078 CTRCQ99895 268 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 CCM2Q9BSQ5 444 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 EFHD1Q9BUP0 239 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 RAB33BQ9H082 229 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 OGFRQ9NZT2 677 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 FAM8A1Q9UBU6 413 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 EPHA6Q9UF33 1036 aa16.8■□□□□ 0.28
USP11-202ENST00000377078 AGAP14A8MT82 685 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 E7EVH7 732 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 IFNB1P01574 187 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 CCDC175P0C221 793 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 MTHFD1P11586 935 aaKnown RBP16.79■□□□□ 0.28
USP11-202ENST00000377078 ATP1B2P14415 290 aaPredicted RBP16.79■□□□□ 0.28
USP11-202ENST00000377078 SEPHS1P49903 392 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 GDF10P55107 478 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 FOXM1Q08050 763 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 MSLNQ13421 630 aaPredicted RBP16.79■□□□□ 0.28
USP11-202ENST00000377078 LAMB3Q13751 1172 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 GSE1Q14687 1217 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 POU6F1Q14863 301 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 ZRANB3Q5FWF4 1079 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 CACHD1Q5VU97 1274 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 FAM83HQ6ZRV2 1179 aaPredicted RBP16.79■□□□□ 0.28
USP11-202ENST00000377078 PRSS42Q7Z5A4 293 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 DNAAF3Q8N9W5 541 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 HM13Q8TCT9 377 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 STYXQ8WUJ0 223 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 RSC1A1Q92681 617 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 C12orf66Q96MD2 445 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 WWP1Q9H0M0 922 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 ZNF768Q9H5H4 540 aaKnown RBP16.79■□□□□ 0.28
USP11-202ENST00000377078 NLE1Q9NVX2 485 aaPredicted RBP16.79■□□□□ 0.28
USP11-202ENST00000377078 ZDHHC3Q9NYG2 299 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 PILRAQ9UKJ1 303 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 HEBP2Q9Y5Z4 205 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 COLEC10Q9Y6Z7 277 aa16.79■□□□□ 0.28
USP11-202ENST00000377078 ZNF106Q9H2Y7 1883 aaKnown RBP16.78■□□□□ 0.28
USP11-202ENST00000377078 TCRBV7S2A1N4TA0A589 114 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 H7C0S8 307 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 LIASO43766 372 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 STK17BO94768 372 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 NDUFS1P28331 727 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 CA5AP35218 305 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 FDFT1P37268 417 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 PRLHRP49683 370 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 ARSDP51689 593 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 SRSF6Q13247 344 aaKnown RBP16.78■□□□□ 0.28
USP11-202ENST00000377078 IL11RAQ14626 422 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 SKIDA1Q1XH10 827 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 ARMC6Q6NXE6 501 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 PCSK4Q6UW60 755 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 FAM92BQ6ZTR7 304 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 TAS2R42Q7RTR8 314 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 SLC13A5Q86YT5 568 aaPredicted RBP16.78■□□□□ 0.28
USP11-202ENST00000377078 CFAP206Q8IYR0 622 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 ATG4AQ8WYN0 398 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 UBXN4Q92575 508 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP11-202ENST00000377078 MED8Q96G25 268 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 FAM96AQ9H5X1 160 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 SDK2Q58EX2 2172 aa16.78■□□□□ 0.28
USP11-202ENST00000377078 C17orf113A0A1B0GUU1 675 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 F8W8V4 182 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 QSOX1O00391 747 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 IFRD1O00458 451 aaPredicted RBP16.77■□□□□ 0.28
USP11-202ENST00000377078 GSTM1P09488 218 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 TPH1P17752 444 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 ACRV1P26436 265 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 LEPRP48357 1165 aaKnown RBP16.77■□□□□ 0.28
USP11-202ENST00000377078 ARL4DP49703 201 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 GSTM4Q03013 218 aa16.77■□□□□ 0.28
USP11-202ENST00000377078 CACNG1Q06432 222 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms