RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CCNA2P20248 432 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 PAX3P23760 479 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 MLLT10P55197 1068 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 GNA12Q03113 381 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 LAPTM5Q13571 262 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 ZRANB3Q5FWF4 1079 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 R3HCC1LQ7Z5L2 792 aaKnown RBP13.04□□□□□ -0.32
ACTN1-202ENST00000376839 NAT16Q8N8M0 369 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 FBXO30Q8TB52 745 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 PNPT1Q8TCS8 783 aaKnown RBP13.04□□□□□ -0.32
ACTN1-202ENST00000376839 FIG4Q92562 907 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 CCDC97Q96F63 343 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-202ENST00000376839 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 ZNF583Q96ND8 569 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 CSF3RQ99062 836 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 TDRD1Q9BXT4 1180 aaKnown RBP13.04□□□□□ -0.32
ACTN1-202ENST00000376839 ADNPQ9H2P0 1102 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 TLR8Q9NR97 1041 aaKnown RBP13.04□□□□□ -0.32
ACTN1-202ENST00000376839 VAPAQ9P0L0 249 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 TMEM9Q9P0T7 183 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 CORINQ9Y5Q5 1042 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 ST14Q9Y5Y6 855 aa13.04□□□□□ -0.32
ACTN1-202ENST00000376839 C2orf81A6NN90 581 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 F5H5T6 163 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 OR7A17O14581 309 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 INSIG1O15503 277 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 TSPAN3O60637 253 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 NOL3O60936 208 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 TULP3O75386 442 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 IMPDH2P12268 514 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 RPS24P62847 133 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PIGFQ07326 219 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 ABRAXAS2Q15018 415 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 FAM98BQ52LJ0 330 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CLLU1OSQ5K130 101 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 BROXQ5VW32 411 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 TRIM74Q86UV6 250 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 TRIM73Q86UV7 250 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 RBM12BQ8IXT5 1001 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 OR4F6Q8NGB9 312 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 UBA2Q9UBT2 640 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CHD5Q8TDI0 1954 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 DYTNA2CJ06 578 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 NOBOXO60393 691 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 KCNH1O95259 989 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 JUNBP17275 347 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CR2P20023 1033 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 LPOP22079 712 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CRHBPP24387 322 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PIGAP37287 484 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CHRNB3Q05901 458 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 DSC1Q08554 894 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PPP1R8Q12972 351 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CBX2Q14781 532 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 IMPG1Q17R60 797 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 GOLGA7Q7Z5G4 137 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 SEPT5Q99719 369 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 C17orf80Q9BSJ5 609 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 IKZF5Q9H5V7 419 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 OLA1Q9NTK5 396 aaKnown RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PCDHGA8Q9Y5G5 932 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 ZFP37Q9Y6Q3 630 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 E5RI56 91 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 ARNTLO00327 626 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 TLR5O60602 858 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 ABCB7O75027 752 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PWP1Q13610 501 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 PTGR1Q14914 329 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 TAF1CQ15572 869 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 SULT1C3Q6IMI6 304 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 FAM43BQ6ZT52 329 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 RTN4RL1Q86UN2 441 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-202ENST00000376839 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 MBOAT4Q96T53 435 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 AMBRA1Q9C0C7 1298 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 COMMD8Q9NX08 183 aa13.03□□□□□ -0.32
ACTN1-202ENST00000376839 HTR1AP08908 422 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 MAGEA11P43364 429 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 PIK3CGP48736 1102 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 TTPAP49638 278 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 CCR3P51677 355 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 TMBIM6P55061 237 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 BFSP2Q13515 415 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 KIAA0040Q15053 153 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 MOGQ16653 247 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 MEP1AQ16819 746 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 C16orf87Q6PH81 154 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
ACTN1-202ENST00000376839 DNAJC14Q6Y2X3 702 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-202ENST00000376839 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms