RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HYLS1Q96M11 299 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 HNRNPABQ99729 332 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PCDH12Q9NPG4 1184 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 GON4LQ3T8J9 2241 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CKMP06732 381 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 HNRNPLP14866 589 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 WDR4P57081 412 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SMU1Q2TAY7 513 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TATDN1Q6P1N9 297 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 LRRC58Q96CX6 371 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PSKH2Q96QS6 385 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 XKR8Q9H6D3 395 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TDRKHQ9Y2W6 561 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PXDNQ92626 1479 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PSIP1O75475 530 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 TGM6O95932 706 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 RLN2P04090 185 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 RHOQP17081 205 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 AP1S1P61966 158 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ADAM8P78325 824 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 AHSA2Q719I0 299 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF367Q7RTV3 350 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 RERGLQ9H628 205 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 XKR6Q5GH73 641 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 KLHL6Q8WZ60 621 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 C12orf43Q96C57 262 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 FDXACB1Q9BRP7 624 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 DPAGT1Q9H3H5 408 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 THG1LQ9NWX6 298 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 A8MUI8 341 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 NDST3O95803 873 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 HOXD8P13378 290 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 CERKQ8TCT0 537 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 C2orf15Q8WU43 125 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 NCSTNQ92542 709 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 TRIB3Q96RU7 358 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SEZ6LQ9BYH1 1024 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 TRIM36Q9NQ86 728 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 C12orf4Q9NQ89 552 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 C1orf109Q9NX04 203 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 NFKBIL1Q9UBC1 381 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 CHD4Q14839 1912 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SLC15A5A6NIM6 579 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 GRID2O43424 1007 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 OR8H3Q8N146 312 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ANKFN1Q8N957 763 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ZC3H10Q96K80 434 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 GATA5Q9BWX5 397 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 LOC100130705A0A1B0GUX0 176 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 DCKP27707 260 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 CCNFP41002 786 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 PPP3R1P63098 170 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 OGFRL1Q5TC84 451 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 RTL4Q6ZR62 310 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ZDHHC21Q8IVQ6 265 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 COMMD4Q9H0A8 199 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SPATC1LQ9H0A9 340 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ERVK-11Q9UQG0 969 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 MYH1P12882 1939 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 MYH2Q9UKX2 1941 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SH3D21A4FU49 640 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 FPGTO14772 594 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 MBL2P11226 248 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 GSTM2P28161 218 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 RGS1Q08116 209 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 HSDL1Q3SXM5 330 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 PLD6Q8N2A8 252 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 KLHL36Q8N4N3 616 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SPERTQ8NA61 448 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 PIF1Q9H611 641 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 TEX264Q9Y6I9 313 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 INSRRP14616 1297 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ATF4P18848 351 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ADRA1BP35368 520 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 MAPK12P53778 367 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 BOP1Q14137 746 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 INTS5Q6P9B9 1019 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 INTS7Q9NVH2 962 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 A6NHS1 94 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 E7ESA3 106 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 CLCN3P51790 818 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 ABHD18Q0P651 414 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 TRMT11Q7Z4G4 463 aaKnown RBP10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SLC22A17Q8WUG5 538 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 SOCS4Q8WXH5 440 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 PREBQ9HCU5 417 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 UBQLN2Q9UHD9 624 aa10.07□□□□□ -0.8
PTCH1-204ENST00000375290 KCNU1A8MYU2 1149 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 IFT27Q9BW83 186 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 PCDH10Q9P2E7 1040 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 C2CD4BA6NLJ0 364 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 SEPHS1P49903 392 aa10.06□□□□□ -0.8
PTCH1-204ENST00000375290 SCNN1GP51170 649 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms