RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 RAB15P59190 212 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 IRAK1BP1Q5VVH5 260 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 TDRPQ86YL5 185 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 CLHC1Q8NHS4 586 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 AHCYL2Q96HN2 611 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 PDE10AQ9Y233 779 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 COL22A1Q8NFW1 1626 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 MYBPHLA2RUH7 354 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 PCP4L1A6NKN8 68 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 AOC2O75106 756 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 CLDN11O75508 207 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 OGNP20774 298 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 GABRR2P28476 465 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 AQP1P29972 269 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 VWA5B1Q5TIE3 1220 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 CACUL1Q86Y37 369 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 PLD5Q8N7P1 536 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 ZNF248Q8NDW4 579 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 RAB2BQ8WUD1 216 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 ROPN1LQ96C74 230 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 DNAJC1Q96KC8 554 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 ADAMTS5Q9UNA0 930 aa12.15□□□□□ -0.46
NPLOC4-202ENST00000374747 TNFRSF11BO00300 401 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 MPZL2O60487 215 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 LMO2P25791 158 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 RGS1Q08116 209 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 SOWAHAQ2M3V2 549 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 RNASE12Q5GAN4 147 aaKnown RBP12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 ARL13AQ5H913 290 aaPredicted RBP12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 ADGRG2Q8IZP9 1017 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 SVOPLQ8N434 492 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 CSGALNACT1Q8TDX6 532 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 FUBP3Q96I24 572 aaKnown RBP eCLIP12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 TRPS1Q9UHF7 1281 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.47
NPLOC4-202ENST00000374747 FADS2P1A8MWK0 482 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 ZW10O43264 779 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 THOP1P52888 689 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 DAOAP59103 153 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 PPP2R2BQ00005 443 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 SNAPC1Q16533 368 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 KCTD8Q6ZWB6 473 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 C12orf50Q8NA57 414 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 PCYT2Q99447 389 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 EBF3Q9H4W6 596 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 C3orf14Q9HBI5 128 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 NOS1APO75052 506 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 IFNA6P05013 189 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 PGRP06401 933 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 TEX44Q53QW1 395 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 UBE2R2Q712K3 238 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 EXOC2Q96KP1 924 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 FCRL4Q96PJ5 515 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 AARSD1Q9BTE6 412 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 RPP40O75818 363 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 SCELO95171 688 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 KCNE1P15382 129 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 ARFIP1P53367 373 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 ACTR3P61158 418 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 RBBP4Q09028 425 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 VANGL1Q8TAA9 524 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 APOLD1Q96LR9 279 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 SEC14L3Q9UDX4 400 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 A0A0U1RQF3 1178 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 MSI1O43347 362 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 CAPN15O75808 1086 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 CTPS1P17812 591 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 L1CAMP32004 1257 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 GPD2P43304 727 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 LIMK2P53671 638 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 AP3S2P59780 193 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 PARP15Q460N3 678 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 FAM151BQ6UXP7 276 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 ZNF572Q7Z3I7 529 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 TAMM41Q96BW9 452 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 TMCO6Q96DC7 493 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 ZNF354BQ96LW1 612 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 SEMA3GQ9NS98 782 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 CLEC4AQ9UMR7 237 aa12.14□□□□□ -0.47
NPLOC4-202ENST00000374747 ABHD14A-ACY1A0A1B0GW23 586 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 H0Y858 1186 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 COL6A1P12109 1028 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 RHOQP17081 205 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ACADLP28330 430 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ASMTP46597 345 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 CXCR3P49682 368 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 RAPSNQ13702 412 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 E2F2Q14209 437 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
NPLOC4-202ENST00000374747 MYBPC3Q14896 1274 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms