RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 DENND4CQ5VZ89 1909 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 PSMC3P17980 439 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC6A2P23975 617 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SPAM1P38567 509 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 ZFP36L2P47974 494 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 CCNHP51946 323 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 NFYCQ13952 458 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 ABRAXAS2Q15018 415 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 ATP13A5Q4VNC0 1218 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 MTX3Q5HYI7 312 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 LILRA6Q6PI73 481 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 ADAMTSL2Q86TH1 951 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SKA2Q8WVK7 121 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 EME1Q96AY2 570 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 LRRC58Q96CX6 371 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 GPATCH1Q9BRR8 931 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC52A3Q9NQ40 469 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 AIG1Q9NVV5 245 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 UBAP1Q9NZ09 502 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 CXXC1Q9P0U4 656 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 SZT2Q5T011 3432 aa15.74■□□□□ 0.11
CNKSR1-202ENST00000374253 S100BP04271 92 aaPredicted RBP15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 MTHFD1P11586 935 aaKnown RBP15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 NCK1P16333 377 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 PPM1AP35813 382 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 PSMD8P48556 350 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 KCNK10P57789 538 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 RHDQ02161 417 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 NR6A1Q15406 480 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 MYLK3Q32MK0 819 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 C22orf39Q6P5X5 142 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 ELMOD1Q8N336 334 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 ZBTB2Q8N680 514 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 ZNF382Q96SR6 550 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 MRGBPQ9NV56 204 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 INTS7Q9NVH2 962 aaKnown RBP15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 SAGE1Q9NXZ1 904 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 APPL1Q9UKG1 709 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 LTBP2Q14767 1821 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 FAM149AA5PLN7 773 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 PEX1O43933 1283 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC22A3O75751 556 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 LINC00271P0C7V0 271 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 PRR35P0CG20 571 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 PTSQ03393 145 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 ATP6AP1LQ52LC2 224 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC2A7Q6PXP3 512 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 NXPE1Q8N323 547 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 CPXM2Q8N436 756 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 ROPN1LQ96C74 230 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 MTFMTQ96DP5 389 aaKnown RBP15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 BBS2Q9BXC9 721 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 WWOXQ9NZC7 414 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 ASB3Q9Y575 518 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 AP4B1Q9Y6B7 739 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 V9GYQ6 96 aa15.73■□□□□ 0.11
CNKSR1-202ENST00000374253 RAD51BO15315 384 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 MATN4O95460 622 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 C8BP07358 591 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 G6PDP11413 515 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CD9P21926 228 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 SNRPD1P62314 119 aaKnown RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 ARHGEF7Q14155 803 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CBX2Q14781 532 aaPredicted RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC5A9Q2M3M2 681 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 ZNF366Q8N895 744 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CYB5D2Q8WUJ1 264 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CIB1Q99828 191 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 SUV39H2Q9H5I1 410 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 COQ10BQ9H8M1 238 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CNOT6Q9ULM6 557 aaKnown RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 POLR3HQ9Y535 204 aaPredicted RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 PTPRSQ13332 1948 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 SCN8AQ9UQD0 1980 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 C15orf38-AP3S2A0A0A6YYH1 394 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CCDC154A6NI56 674 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 BBIP1A8MTZ0 92 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 SOCS5O75159 536 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 ADH1AP07327 375 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 CKMT2P17540 419 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 GGT5P36269 586 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 RGS4P49798 205 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 POLR2JP52435 117 aaKnown RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 DGKQP52824 942 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 B4GALNT1Q00973 533 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 HMGCS1Q01581 520 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 RFTN2Q52LD8 501 aaPredicted RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 HMBOX1Q6NT76 420 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 HACD2Q6Y1H2 254 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 ARPINQ7Z6K5 226 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 MILR1Q7Z6M3 343 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 PROKR1Q8TCW9 393 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 TMEM79Q9BSE2 394 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 NUSAP1Q9BXS6 441 aaKnown RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 FAM126AQ9BYI3 521 aaPredicted RBP15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 SLC24A3Q9HC58 644 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 ZNHIT2Q9UHR6 403 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 ANGPTL3Q9Y5C1 460 aa15.72■□□□□ 0.11
CNKSR1-202ENST00000374253 AKAP10O43572 662 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms