RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CFAP206Q8IYR0 622 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 GPR135Q8IZ08 494 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 OR14I1A6ND48 311 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ZSCAN5BA6NJL1 495 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 MID1O15344 667 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 CDK14O94921 469 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 MPSTP25325 297 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 PRKCIP41743 596 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 YAP1P46937 504 aaKnown RBP14.17□□□□□ -0.14
TRAF1-201ENST00000373887 MAN2A2P49641 1150 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 SMARCB1Q12824 385 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 SP140Q13342 867 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TYSND1Q2T9J0 566 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TCEAL6Q6IPX3 200 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 PYHIN1Q6K0P9 492 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 CCDC80Q76M96 950 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 HDDC3Q8N4P3 179 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 OR2T12Q8NG77 320 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TOP1MTQ969P6 601 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 SLCO1B3Q9NPD5 702 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 TRPV5Q9NQA5 729 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 ARHGEF4Q9NR80 690 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 RAB21Q9UL25 225 aa14.17□□□□□ -0.14
TRAF1-201ENST00000373887 A8MUI8 341 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 SYN3O14994 580 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 AXIN1O15169 862 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 HDAC3O15379 428 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 PAX3P23760 479 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 NRIP1P48552 1158 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 APLP1P51693 650 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 TXNL4AP83876 142 aaKnown RBP14.16□□□□□ -0.14
TRAF1-201ENST00000373887 AMZ1Q400G9 498 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 RBFAQ8N0V3 343 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 XAGE5Q8WWM1 108 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CSPG4P5Q96PW8 444 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 STXBP5LQ9Y2K9 1186 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 A0A1W2PPM1 405 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 IRGMA1A4Y4 181 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 E7ENX8 843 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 SNX4O95219 450 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 MT-ND1P03886 318 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 ADRA1BP35368 520 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 MAGEA2P43356 314 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CCNYL2Q5T2Q4 361 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 LCN1P1Q5VSP4 162 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 LCLAT1Q6UWP7 414 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 SATL1Q86VE3 508 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 DHX33Q9H6R0 707 aaKnown RBP14.16□□□□□ -0.14
TRAF1-201ENST00000373887 PNPLA8Q9NP80 782 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 MALT1Q9UDY8 824 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 KCNE2Q9Y6J6 123 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 RHPN2P1A8MT19 583 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CHST10O43529 356 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CBFA2T3O75081 653 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 LYPLA2O95372 231 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 DHPSP49366 369 aaPredicted RBP14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CHSY3Q70JA7 882 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 PEX5LQ8IYB4 626 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 ZZZ3Q8IYH5 903 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 PRR5-ARHGAP8B1AHC4 643 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 QSOX1O00391 747 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 GABRB2P47870 512 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 LBX1P52954 281 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 ARHGAP8P85298 464 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 TIGD5Q53EQ6 642 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CUZD1Q86UP6 607 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 ECHDC2Q86YB7 292 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 SPATA22Q8NHS9 363 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 CIB1Q99828 191 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 GLOD4Q9HC38 313 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 INTS10Q9NVR2 710 aaKnown RBP14.16□□□□□ -0.14
TRAF1-201ENST00000373887 LTN1O94822 1766 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 C22orf31O95567 290 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 PDK4Q16654 411 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 OR8H3Q8N146 312 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 PPM1MQ96MI6 270 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 ACBD6Q9BR61 282 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 MAGEL2Q9UJ55 1249 aa14.16□□□□□ -0.14
TRAF1-201ENST00000373887 SAMD4AQ9UPU9 718 aaKnown RBP14.16□□□□□ -0.14
TRAF1-201ENST00000373887 IGLV3-22A0A075B6J6 115 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 EOMESO95936 686 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 FGF1P05230 155 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 ITGAVP06756 1048 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 CD48P09326 243 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 KELP23276 732 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 SP2Q02086 613 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 FAM182AQ5T1J6 154 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 CYB5D2Q8WUJ1 264 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 GTPBP2Q9BX10 602 aaKnown RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 ALG2Q9H553 416 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 GMEB2Q9UKD1 530 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 NCANO14594 1321 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 SLIT3O75094 1523 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 TTC24A2A3L6 582 aaPredicted RBP14.15□□□□□ -0.14
TRAF1-201ENST00000373887 E2F2Q14209 437 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 C1orf189Q5VU69 101 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 AHSA2Q719I0 299 aa14.15□□□□□ -0.14
TRAF1-201ENST00000373887 EXOSC8Q96B26 276 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms