RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 GAB3Q8WWW8 586 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 MAELQ96JY0 434 aaKnown RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 IL17FQ96PD4 163 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 CCDC3Q9BQI4 270 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 DRC3Q9H069 523 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 CDH19Q9H159 772 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 CAB39LQ9H9S4 337 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 C11orf16Q9NQ32 467 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 TBCCD1Q9NVR7 557 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 AKAP7Q9P0M2 348 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PHTF1Q9UMS5 762 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 CCDC168Q8NDH2 2452 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SHROOM3Q8TF72 1996 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 ARHGEF17Q96PE2 2063 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 FOXO6A8MYZ6 492 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 GRID2O43424 1007 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HYAL3O43820 417 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 PHF2O75151 1096 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PGLSO95336 258 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HIST1H2AGP0C0S8 130 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 GFAPP14136 432 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HIST1H2ADP20671 130 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 IDSP22304 550 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HNRNPKP61978 463 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP1-202ENST00000371146 RSPO4Q2I0M5 234 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 PARP6Q2NL67 630 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 MPP7Q5T2T1 576 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 STPG1Q5TH74 334 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 TTC27Q6P3X3 843 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SHISA6Q6ZSJ9 500 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 CEP128Q6ZU80 1094 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 ZSWIM9Q86XI8 627 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PELI3Q8N2H9 469 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 GOLM1Q8NBJ4 401 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PRSS33Q8NF86 280 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 BCAS4Q8TDM0 211 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 WDR60Q8WVS4 1066 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HIST1H2AHQ96KK5 128 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 FMO2Q99518 471 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HIST1H2AJQ99878 128 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 H2AFJQ9BTM1 129 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 FAM124BQ9H5Z6 455 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 FGF22Q9HCT0 170 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 NOP53Q9NZM5 478 aaKnown RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 SDR42E2A6NKP2 422 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SUPT3HO75486 399 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 STAMBPO95630 424 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 C9P02748 559 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 FGF1P05230 155 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PRKAR1AP10644 381 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PORP16435 677 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 MSH2P43246 934 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 ID4P47928 161 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 B2MP61769 119 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 MPP1Q00013 466 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 CSHL1Q14406 222 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 FASTKD3Q14CZ7 662 aaKnown RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 SLC1A5Q15758 541 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 MRNIPQ6NTE8 343 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SUSD1Q6UWL2 747 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 UNC5AQ6ZN44 842 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 STRA8Q7Z7C7 330 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 IFT20Q8IY31 132 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PPFIBP2Q8ND30 876 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 GPR26Q8NDV2 337 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 LCN9Q8WX39 176 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 LMLNQ96KR4 655 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 WDR92Q96MX6 357 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 LRRC40Q9H9A6 602 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PARVBQ9HBI1 364 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP1-202ENST00000371146 TRHDEQ9UKU6 1024 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 PPM1HQ9ULR3 514 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 BTBD3Q9Y2F9 522 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 hCG_2014768A0A024R1R8 64 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 SRRM3A6NNA2 597 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 DRGXA6NNA5 263 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 PRAMEF26H0Y7S4 382 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 NIPSNAP2O75323 286 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TOP3BO95985 862 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 OXTRP30559 389 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 VIPR1P32241 457 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 BLKP51451 505 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ARSDP51689 593 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 CTBSQ01459 385 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 GALNT2Q10471 571 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 SPIDRQ14159 915 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 CCNG2Q16589 344 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 PPM1JQ5JR12 505 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 FAM209AQ5JX71 171 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 GPRC6AQ5T6X5 926 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ALKBH2Q6NS38 261 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 EFL1Q7Z2Z2 1120 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 AMZ2Q86W34 360 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TRIML2Q8N7C3 387 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms