RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZNF449Q6P9G9 518 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 SLC9B2Q86UD5 537 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 C17orf82Q86X59 251 aaPredicted RBP14.56□□□□□ -0.08
COL9A1-204ENST00000370496 CILP2Q8IUL8 1156 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 IGDCC3Q8IVU1 814 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 Q8N9G6 341 aaPredicted RBP14.56□□□□□ -0.08
COL9A1-204ENST00000370496 CALML6Q8TD86 181 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 ELMO1Q92556 727 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 COG4Q9H9E3 785 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 PPANQ9NQ55 473 aaKnown RBP14.56□□□□□ -0.08
COL9A1-204ENST00000370496 PSMD13Q9UNM6 376 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 TEX264Q9Y6I9 313 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 FAM169AQ9Y6X4 670 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 SPEGQ15772 3267 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 SPTBN2O15020 2390 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 PRR19A6NJB7 356 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 E7ESA3 106 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 ZW10O43264 779 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 HYAL3O43820 417 aaPredicted RBP14.55□□□□□ -0.08
COL9A1-204ENST00000370496 ITGB6P18564 788 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 SLC1A2P43004 574 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 FASLGP48023 281 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 FASTKD3Q14CZ7 662 aaKnown RBP14.55□□□□□ -0.08
COL9A1-204ENST00000370496 GLE1Q53GS7 698 aaKnown RBP14.55□□□□□ -0.08
COL9A1-204ENST00000370496 HSP90AA5PQ58FG0 334 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 HES3Q5TGS1 186 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 IYDQ6PHW0 289 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 UNC5AQ6ZN44 842 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 RAB44Q7Z6P3 723 aaPredicted RBP14.55□□□□□ -0.08
COL9A1-204ENST00000370496 CCDC25Q86WR0 208 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 LRRC6Q86X45 466 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 LMNTD2Q8IXW0 634 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 CFAP206Q8IYR0 622 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 FBXO36Q8NEA4 188 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 GPR150Q8NGU9 434 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 FBXO25Q8TCJ0 367 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 ART4Q93070 314 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 CXorf40BQ96DE9 158 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 CERS2Q96G23 380 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 TCF12Q99081 682 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 WDR83Q9BRX9 315 aaKnown RBP14.55□□□□□ -0.08
COL9A1-204ENST00000370496 WWP1Q9H0M0 922 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 SAYSD1Q9NPB0 183 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 INTS10Q9NVR2 710 aaKnown RBP14.55□□□□□ -0.08
COL9A1-204ENST00000370496 CPNE7Q9UBL6 633 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 RABGEF1Q9UJ41 708 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 ACSL5Q9ULC5 683 aa14.55□□□□□ -0.08
COL9A1-204ENST00000370496 PTPRBP23467 1997 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 C17orf113A0A1B0GUU1 675 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 MED19A0JLT2 244 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 OR52A4PA6NMU1 304 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 ESPNB1AK53 854 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 ZNF500O60304 480 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 OPA1O60313 960 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 VIPP01282 170 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 RPLP0P05388 317 aaKnown RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 CLDN6P56747 220 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 INSM1Q01101 510 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 SPIDRQ14159 915 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 TMED2Q15363 201 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 METRNLQ641Q3 311 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 ZDHHC24Q6UX98 284 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 WASH2PQ6VEQ5 465 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 CAPN12Q6ZSI9 719 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 SPRED1Q7Z699 444 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 ZNF761Q86XN6 746 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 DENND6AQ8IWF6 608 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 UNC5BQ8IZJ1 945 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 GALNT15Q8N3T1 639 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 CHCHD4Q8N4Q1 142 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 LILRA3Q8N6C8 439 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 WDR48Q8TAF3 677 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 PYROXD1Q8WU10 500 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 LPGAT1Q92604 370 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 PANX3Q96QZ0 392 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 SLC38A3Q99624 504 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 SARS2Q9NP81 518 aaKnown RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 WASH6PQ9NQA3 447 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 FAM114A2Q9NRY5 505 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 IARS2Q9NSE4 1012 aaKnown RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 POT1Q9NUX5 634 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 IMP3Q9NV31 184 aaKnown RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 SCHIP1Q9P0W5 487 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-204ENST00000370496 WDR37Q9Y2I8 494 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 PCDHB1Q9Y5F3 818 aa14.54□□□□□ -0.08
COL9A1-204ENST00000370496 IFRD1O00458 451 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-204ENST00000370496 LIN7AO14910 233 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-204ENST00000370496 EIF3HO15372 352 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL9A1-204ENST00000370496 ERVK-10P10266 1014 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 BRAFP15056 766 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 PNLIPP16233 465 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 RPS3P23396 243 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL9A1-204ENST00000370496 ALDH4A1P30038 563 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 PREPP48147 710 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 UBE2IP63279 158 aaKnown RBP14.53□□□□□ -0.08
COL9A1-204ENST00000370496 CTBP1Q13363 440 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 BRD3Q15059 726 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 TRADDQ15628 312 aa14.53□□□□□ -0.08
COL9A1-204ENST00000370496 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms