RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PRKD3O94806 890 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 CSF2P04141 144 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 CCR1P32246 355 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 CD68P34810 354 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-201ENST00000361716 EIF2DP41214 584 aaKnown RBP12.55□□□□□ -0.4
VAMP1-201ENST00000361716 ACADSBP45954 432 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 POLD2P49005 469 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 SH3BP2P78314 561 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 C9orf57Q5W0N0 161 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 GPC2Q8N158 579 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 ANKRD49Q8WVL7 239 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 UBE2FQ969M7 185 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 PMEPA1Q969W9 287 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 VPS35Q96QK1 796 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 EIF3LQ9Y262 564 aaKnown RBP12.55□□□□□ -0.4
VAMP1-201ENST00000361716 TTC34A8MYJ7 566 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 UBXN8O00124 270 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 AZIN1O14977 448 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 C22orf31O95567 290 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 ALPLP05186 524 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 LTA4HP09960 611 aaKnown RBP12.55□□□□□ -0.4
VAMP1-201ENST00000361716 TGFB3P10600 412 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 ATF4P18848 351 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-201ENST00000361716 CLCA4Q14CN2 919 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 RBBP7Q16576 425 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 SDHAF4Q5VUM1 108 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 LRRC8DQ7L1W4 858 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 GDPD3Q7L5L3 318 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 DET1Q7L5Y6 550 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 FAM126BQ8IXS8 530 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 CLYBLQ8N0X4 340 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 JPH3Q8WXH2 748 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-201ENST00000361716 TMEM125Q96AQ2 219 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 MAP6Q96JE9 813 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 CYP2S1Q96SQ9 504 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 ADGRE2Q9UHX3 823 aa12.55□□□□□ -0.4
VAMP1-201ENST00000361716 MYBPHLA2RUH7 354 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 KATNA1O75449 491 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 ZNF682O95780 498 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 C1RP00736 705 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 MAGEA12P43365 314 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 ZNF135P52742 658 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 GRIK4Q16099 956 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 DENND5AQ6IQ26 1287 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 LARP4Q71RC2 724 aaKnown RBP eCLIP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 TCAIMQ8N3R3 496 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 SLC43A3Q8NBI5 491 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 Q96MT0 163 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 TMLHEQ9NVH6 421 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 KIF17Q9P2E2 1029 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 VWA7Q9Y334 891 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 KCTD3Q9Y597 815 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 SLC12A8A0AV02 714 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 TNFRSF21O75509 655 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 ALX3O95076 343 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 NPR3P17342 541 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 KCNC1P48547 511 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 NPY2RP49146 381 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 OAZ1P54368 228 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 P2RX3P56373 397 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 ENPEPQ07075 957 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 BCL7AQ4VC05 210 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 PRAMEF19Q5SWL8 479 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 ZNF544Q6NX49 715 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 DCP1BQ8IZD4 617 aaKnown RBP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 CDC26Q8NHZ8 85 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 GIPC2Q8TF65 315 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 LPPQ93052 612 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 NEDD4LQ96PU5 975 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 FYTTD1Q96QD9 318 aaKnown RBP12.54□□□□□ -0.4
VAMP1-201ENST00000361716 ABCG8Q9H221 673 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 C3orf18Q9UK00 162 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 PTPRFP10586 1907 aa12.54□□□□□ -0.4
VAMP1-201ENST00000361716 RBP1P09455 135 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 HSD17B1P14061 328 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 WEE1P30291 646 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 SELPLGQ14242 412 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 AGAP6Q5VW22 663 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 LBX2Q6XYB7 198 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 NLGN4XQ8N0W4 816 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 EID3Q8N140 333 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 OR10A6Q8NH74 314 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 PIK3R3Q92569 461 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 AGAP4Q96P64 663 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 MMP28Q9H239 520 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 INTS6Q9UL03 887 aaKnown RBP12.53□□□□□ -0.4
VAMP1-201ENST00000361716 TPRKBQ9Y3C4 175 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 GMPPBQ9Y5P6 360 aa12.53□□□□□ -0.4
VAMP1-201ENST00000361716 OR6C70A6NIJ9 312 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms