RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 C6orf136Q5SQH8 315 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 KRT39Q6A163 491 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 FAM109BQ6ICB4 259 aaPredicted RBP4.78□□□□□ -1.64
RPL39-201ENST00000361575 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 C11orf88Q6PI97 169 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 ZBTB49Q6ZSB9 765 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 ABI3BPQ7Z7G0 1075 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 DSG4Q86SJ6 1040 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 NUP93Q8N1F7 819 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 SIX6OS1Q8N1H7 587 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 EXD1Q8NHP7 514 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 THAP6Q8TBB0 222 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 DENND1AQ8TEH3 1009 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 ROBO4Q8WZ75 1007 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 MTERF1Q99551 399 aaKnown RBP4.78□□□□□ -1.64
RPL39-201ENST00000361575 SLC25A33Q9BSK2 321 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 MMTAG2Q9BU76 263 aaKnown RBP4.78□□□□□ -1.64
RPL39-201ENST00000361575 KATNB1Q9BVA0 655 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 SEMA6AQ9H2E6 1030 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 TRPV4Q9HBA0 871 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 PCDH9Q9HC56 1237 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 MYNNQ9NPC7 610 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 RNF150Q9ULK6 438 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 FZD10Q9ULW2 581 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 SNX5Q9Y5X3 404 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 EVPLQ92817 2033 aa4.78□□□□□ -1.64
RPL39-201ENST00000361575 PTPRCP08575 1304 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 A0A0U1RQJ8 604 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 PRSS51A0A1B0GVH4 220 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 HTR3EA5X5Y0 456 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 FAM86B1E9PN63 330 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 SLC16A5O15375 505 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 GCNT3O95395 438 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 FAM86B2P0C5J1 330 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 PSG1P11464 419 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 S1PR1P21453 382 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 TNFRSF8P28908 595 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 C21orf33P30042 268 aaPredicted RBP4.77□□□□□ -1.65
RPL39-201ENST00000361575 COG7P83436 770 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 ROR2Q01974 943 aaKnown RBP4.77□□□□□ -1.65
RPL39-201ENST00000361575 PTK6Q13882 451 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 NR1D2Q14995 579 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 ETFDHQ16134 617 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 NHSL2Q5HYW2 709 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 RAD9BQ6WBX8 426 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 COLCA1Q6ZS62 124 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 DGLUCYQ7Z3D6 616 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 TECPR1Q7Z6L1 1165 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 GPR180Q86V85 440 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 GLCCI1Q86VQ1 547 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 FAM219AQ8IW50 185 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 PGBD5Q8N414 524 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 AFAP1L1Q8TED9 768 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 SLC38A5Q8WUX1 472 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 WASF1Q92558 559 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 FAM81BQ96LP2 452 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 CCDC114Q96M63 670 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 MOV10L1Q9BXT6 1211 aaKnown RBP4.77□□□□□ -1.65
RPL39-201ENST00000361575 WNT5BQ9H1J7 359 aa4.77□□□□□ -1.65
RPL39-201ENST00000361575 DDX43Q9NXZ2 648 aaKnown RBP4.77□□□□□ -1.65
RPL39-201ENST00000361575 IGSF1Q8N6C5 1336 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 LINC01553A4QN01 128 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 C5orf60A6NFR6 353 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 TMEM178BH3BS89 294 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 MID1O15344 667 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 IPO8O15397 1037 aaKnown RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 RFPL2O75678 378 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 SYF2O95926 243 aaKnown RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 RAB40ALP0C0E4 278 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 OR2T7P0C7T2 308 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 SRCP12931 536 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 ATP6V1B1P15313 513 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 CASTP20810 708 aaKnown RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 CTSCP53634 463 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 POLR2LP62875 67 aaKnown RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 YWHAHQ04917 246 aaPredicted RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 SCN1BQ07699 218 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 GRTP1Q5TC63 336 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 KRTAP1-3Q8IUG1 177 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 MFN1Q8IWA4 741 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 C1orf87Q8N0U7 546 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 C1orf52Q8N6N3 182 aaKnown RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 PAPD5Q8NDF8 572 aaKnown RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 GRAPLQ8TC17 118 aaPredicted RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 GRK7Q8WTQ7 553 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 SMPDL3BQ92485 455 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 RMDN2Q96LZ7 410 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 CPNE1Q99829 537 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 TMEM79Q9BSE2 394 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 MLPHQ9BV36 600 aaPredicted RBP4.76□□□□□ -1.65
RPL39-201ENST00000361575 MRIQ9BWK5 157 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 DCLK3Q9C098 648 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 HHATLQ9HCP6 504 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 Q9N2K0 584 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms