RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PTERQ96BW5 349 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 SGF29Q96ES7 293 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 PDLIM5Q96HC4 596 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 ELAC2Q9BQ52 826 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 FOXQ1Q9C009 403 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 SLC6A17Q9H1V8 727 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 PREBQ9HCU5 417 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 THAP1Q9NVV9 213 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 TMCO1Q9UM00 188 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 NPEPPSL1A6NEC2 478 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 IGLON5A6NGN9 336 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 SYCE1LA8MT33 242 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 A8MT66 165 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 EIF3FO00303 357 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 BTN3A1O00481 513 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 DLX3O60479 287 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 SNX3O60493 162 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 KERAO60938 352 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 MTX2O75431 263 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 TSPAN12O95859 305 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ENO3P13929 434 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 TGM1P22735 817 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 MAGEA9P43362 315 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 SLC1A6P48664 564 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ADPRHP54922 357 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 DNAJB13P59910 316 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 RPS21P63220 83 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 OCRLQ01968 901 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 GTF2H3Q13889 308 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ADAMTSL4Q6UY14 1074 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ZNF771Q7L3S4 317 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 DET1Q7L5Y6 550 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ADAMTSL2Q86TH1 951 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 CRLF3Q8IUI8 442 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 SPNS2Q8IVW8 549 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ANKS4BQ8N8V4 417 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 OR14C36Q8NHC7 312 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 PPP4R1Q8TF05 950 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 EEF1AKMT1Q8WVE0 214 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 EXT2Q93063 718 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 MRGPRX1Q96LB2 322 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ATOH8Q96SQ7 321 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 C1QTNF7Q9BXJ2 289 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 CHRDQ9H2X0 955 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 CDV3Q9UKY7 258 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 RNF112Q9ULX5 631 aa13.63□□□□□ -0.23
PDLIM5-203ENST00000359265 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 SUPT3HB4E1H0 165 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 RNGTTO60942 597 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 SUPT3HO75486 399 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 IPO13O94829 963 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 PCCBP05166 539 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 TPBGLP0DKB5 382 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 NDUFV2P19404 249 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 TEAD1P28347 426 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 SERPINB5P36952 375 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 PRLHRP49683 370 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 ABCE1P61221 599 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 NFKB2Q00653 900 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 FZD5Q13467 585 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 NUMA1Q14980 2115 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 OR4D1Q15615 310 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 TSNQ15631 228 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 MAP7D1Q3KQU3 841 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 KHDC1Q4VXA5 237 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 SEL1L3Q68CR1 1132 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 CGB2Q6NT52 195 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 NEK5Q6P3R8 708 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 RAB44Q7Z6P3 723 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 TSTD1Q8NFU3 115 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 NAT14Q8WUY8 206 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 CLDN23Q96B33 292 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 HIC2Q96JB3 615 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 SEC16BQ96JE7 1060 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 GATA5Q9BWX5 397 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 TRIM55Q9BYV6 548 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 KDM4CQ9H3R0 1056 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 KLHL14Q9P2G3 628 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 ZFR2Q9UPR6 939 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 SIT1Q9Y3P8 196 aa13.62□□□□□ -0.23
PDLIM5-203ENST00000359265 A0A1W2PQU0 124 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 K7ESM1 405 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 CDC7O00311 574 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 VEGFDO43915 354 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 NPHS1O60500 1241 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 SNUPNO95149 360 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 TGDSO95455 350 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 HSPA4LO95757 839 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 S100BP04271 92 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 GABRG2P18507 467 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 AOAHP28039 575 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 OVGP1Q12889 678 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 TMEM115Q12893 351 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 SGCGQ13326 291 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms