RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 TAS1R1Q7RTX1 841 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 GPR180Q86V85 440 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 DTWD1Q8N5C7 304 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 DPP10Q8N608 796 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 NUDT8Q8WV74 236 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 PLD4Q96BZ4 506 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 C12orf43Q96C57 262 aaKnown RBP8.47□□□□□ -1.05
RFX3-202ENST00000358730 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
RFX3-202ENST00000358730 TTPALQ9BTX7 342 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 NPLQ9BXD5 320 aaPredicted RBP8.47□□□□□ -1.05
RFX3-202ENST00000358730 GPR63Q9BZJ6 419 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 ACTL8Q9H568 366 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 ZNF711Q9Y462 761 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 PCDHB9Q9Y5E1 797 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 TNPO3Q9Y5L0 923 aaKnown RBP8.47□□□□□ -1.05
RFX3-202ENST00000358730 PLXNA4Q9HCM2 1894 aa8.47□□□□□ -1.05
RFX3-202ENST00000358730 DYTNA2CJ06 578 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 ZNF840PA6NDX5 716 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 GRXCR2A6NFK2 248 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 TRIM64A6NGJ6 449 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 OR7A17O14581 309 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 FFAR2O15552 330 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 CA12O43570 354 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 ALBP02768 609 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 CTPS1P17812 591 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 RPL17P18621 184 aaKnown RBP8.46□□□□□ -1.05
RFX3-202ENST00000358730 NFKBIAP25963 317 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 YAP1P46937 504 aaKnown RBP8.46□□□□□ -1.05
RFX3-202ENST00000358730 GALK1P51570 392 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 RPL38P63173 70 aaKnown RBP8.46□□□□□ -1.05
RFX3-202ENST00000358730 CTBSQ01459 385 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 CACNG1Q06432 222 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 ABRAXAS2Q15018 415 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 AAK1Q2M2I8 961 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 AP5B1Q2VPB7 878 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 PTRHD1Q6GMV3 140 aaKnown RBP8.46□□□□□ -1.05
RFX3-202ENST00000358730 SBSNQ6UWP8 590 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 DLEU7Q6UYE1 221 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 LYSMD3Q7Z3D4 306 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 PDZD8Q8NEN9 1154 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 ITFG1Q8TB96 612 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 ADAMTS16Q8TE57 1224 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 C2orf15Q8WU43 125 aaKnown RBP8.46□□□□□ -1.05
RFX3-202ENST00000358730 CASD1Q96PB1 797 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 CGREF1Q99674 301 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 APOL5Q9BWW9 433 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 P2RY12Q9H244 342 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 POLR1BQ9H9Y6 1135 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 TMEM45AQ9NWC5 275 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 GALNT8Q9NY28 637 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 PKD2L2Q9NZM6 624 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.05
RFX3-202ENST00000358730 A0A0J9YVX5 310 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 RAD51BO15315 384 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 TULP3O75386 442 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 DEAF1O75398 565 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 RSL1D1O76021 490 aaKnown RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 PRAMEF12O95522 483 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 OTCP00480 354 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ALPIP09923 528 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PCNAP12004 261 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 HSPA7P48741 367 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 EMP3P54852 163 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 NUP107P57740 925 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 RHOAP61586 193 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ELAVL2Q12926 359 aaKnown RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 RAB39AQ14964 217 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PCBP2Q15366 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
RFX3-202ENST00000358730 ZIK1Q3SY52 487 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 RFTN2Q52LD8 501 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 ATXN7L2Q5T6C5 722 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 NCEH1Q6PIU2 408 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 TBPL2Q6SJ96 375 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 FAM151BQ6UXP7 276 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 LRRC8DQ7L1W4 858 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 CHST15Q7LFX5 561 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 FBXO22Q8NEZ5 403 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 BPIFB1Q8TDL5 484 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 C17orf80Q9BSJ5 609 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 CLPBQ9H078 707 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 CWH43Q9H720 699 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 IPPKQ9H8X2 491 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 CXorf21Q9HAI6 301 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 IL17CQ9P0M4 197 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ZNF639Q9UID6 485 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ZMYM5Q9UJ78 669 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 FAF1Q9UNN5 650 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 DHRS7Q9Y394 339 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PCDHB1Q9Y5F3 818 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ZNF701M0R085 212 aaPredicted RBP8.46□□□□□ -1.06
RFX3-202ENST00000358730 GMNNO75496 209 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PRAMEF1O95521 474 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 ANXA6P08133 673 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 JAK1P23458 1154 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 STT3AP46977 705 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 PIK3CGP48736 1102 aa8.46□□□□□ -1.06
RFX3-202ENST00000358730 TRAF3Q13114 568 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms