RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PRKD3O94806 890 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 ANXA6P08133 673 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 MLLT6P55198 1093 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-202ENST00000355815 FCHO2Q0JRZ9 810 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 GALNT2Q10471 571 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 CCNYL2Q5T2Q4 361 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 PAQR3Q6TCH7 311 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 CLYBLQ8N0X4 340 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 OR2T12Q8NG77 320 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 OR56A4Q8NGH8 313 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 SMIM14Q96QK8 99 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 EIF2B3Q9NR50 452 aaKnown RBP13.91□□□□□ -0.18
SREBF1-202ENST00000355815 PHF24Q9UPV7 400 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 RWDD3Q9Y3V2 267 aa13.91□□□□□ -0.18
SREBF1-202ENST00000355815 A0A088AWK7 358 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 VARSP26640 1264 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 C1QTNF12Q5T7M4 302 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ARMC12Q5T9G4 340 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 RAB43Q86YS6 212 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 RAB2BQ8WUD1 216 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ISOC1Q96CN7 298 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 SLC45A3Q96JT2 553 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 LSM7Q9UK45 103 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 AGO1Q9UL18 857 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 EMCNQ9ULC0 261 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 A0A0D9SEW6 157 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 HMX2A2RU54 273 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 PRR23AA6NEV1 266 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 PIP5K1BO14986 540 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 AIREO43918 545 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CHRNA1P02708 482 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 RPL10P27635 214 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CD83Q01151 205 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 BNIP2Q12982 314 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ATXN7L2Q5T6C5 722 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ZCCHC8Q6NZY4 707 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 SLC24A5Q71RS6 500 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CIPCQ9C0C6 399 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 TBL1XO60907 577 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 JUNP05412 331 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 KRT20P35900 424 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CAPGP40121 348 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ARSDP51689 593 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 LGALS3BPQ08380 585 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 PHKG1Q16816 387 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 FAM219BQ5XKK7 198 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CASP12Q6UXS9 341 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 CPNE9Q8IYJ1 553 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 GRIN3AQ8TCU5 1115 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 KCTD13Q8WZ19 329 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 GATA6Q92908 595 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 C19orf60Q96EN9 201 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 HIPK3Q9H422 1215 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 TRIM45Q9H8W5 580 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 WDR6Q9NNW5 1121 aaKnown RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 FKBPLQ9UIM3 349 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ZFP37Q9Y6Q3 630 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-202ENST00000355815 DLEC1Q9Y238 1755 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 COL4A5P29400 1685 aa13.9□□□□□ -0.18
SREBF1-202ENST00000355815 ZCWPW2A0A1B0GU75 182 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 A8MT66 165 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 BCKDKO14874 412 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 NIPSNAP2O75323 286 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 C1RP00736 705 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 AOC1P19801 751 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 CCND3P30281 292 aaPredicted RBP13.9□□□□□ -0.19
SREBF1-202ENST00000355815 HNRNPDQ14103 355 aaKnown RBP13.9□□□□□ -0.19
SREBF1-202ENST00000355815 TTC23LQ6PF05 361 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 KRT73Q86Y46 540 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 TRIM48Q8IWZ4 208 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 OR52J3Q8NH60 311 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 FCRL5Q96RD9 977 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 OLFM1Q99784 485 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 OCEL1Q9H607 264 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 RAPGEFL1Q9UHV5 662 aa13.9□□□□□ -0.19
SREBF1-202ENST00000355815 A0A1B0GW55 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 GJB3O75712 270 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4L2P0CJ85 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4L3P0CJ86 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4L4P0CJ87 422 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4L5P0CJ88 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4L6P0CJ89 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4L7P0CJ90 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 PIK3C3Q8NEB9 887 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 POF1BQ8WVV4 589 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 DUX4Q9UBX2 424 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 RNASEH2AO75792 299 aaKnown RBP13.89□□□□□ -0.19
SREBF1-202ENST00000355815 UGT2B4P06133 528 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 SLC35E2BP0CK96 405 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 EFNA1P20827 205 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-202ENST00000355815 MTPNP58546 118 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 SLC13A2Q13183 592 aa13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TOP3AQ13472 1001 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-202ENST00000355815 TIMM50Q3ZCQ8 353 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms