RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CSPG4P5Q96PW8 444 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 LGR4Q9BXB1 951 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 SLC6A15Q9H2J7 730 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 TCF7L1Q9HCS4 588 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 NWD1Q149M9 1564 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 PLOD2O00469 737 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 MSI1O43347 362 aaKnown RBP14.72□□□□□ -0.05
LMX1B-201ENST00000355497 PRLP01236 227 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 NAE1Q13564 534 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 HIST1H2AAQ96QV6 131 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 MED11Q9P086 117 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 EIF3KQ9UBQ5 218 aaKnown RBP14.72□□□□□ -0.05
LMX1B-201ENST00000355497 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 ALAS2P22557 587 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 IL12BP29460 328 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 TIE1P35590 1138 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 CLIP4Q8N3C7 705 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 RASGEF1CQ8N431 466 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 OR10H4Q8NGA5 316 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 OR2AJ1Q8NGZ0 328 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 AASSQ9UDR5 926 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 MAFFQ9ULX9 164 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 TESMINQ9Y4I5 508 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 CLDN25C9JDP6 229 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 B4GALT5O43286 388 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 MFSD11O43934 449 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 ZNF823P16415 610 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 ARCN1P48444 511 aaKnown RBP14.72□□□□□ -0.05
LMX1B-201ENST00000355497 PNLIPRP1P54315 467 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 LCP2Q13094 533 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 UBAP2Q5T6F2 1119 aaKnown RBP14.72□□□□□ -0.05
LMX1B-201ENST00000355497 XYLT1Q86Y38 959 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 LRRC20Q8TCA0 184 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 ING5Q8WYH8 240 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 NKD1Q969G9 470 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 TMEM165Q9HC07 324 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 ACSS2Q9NR19 701 aa14.72□□□□□ -0.05
LMX1B-201ENST00000355497 FABP12A6NFH5 140 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 hCG_2039718K7EN88 272 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 DDX6P26196 483 aaKnown RBP eCLIP14.71□□□□□ -0.05
LMX1B-201ENST00000355497 AP1S1P61966 158 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 PRR5P85299 388 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 SMARCB1Q12824 385 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 HSPB3Q12988 150 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 CRY2Q49AN0 593 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 PTPN20Q4JDL3 420 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 METTL21CQ5VZV1 264 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 MSANTD2Q6P1R3 559 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 IRF2BP2Q7Z5L9 587 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 GPC2Q8N158 579 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 CHIAQ9BZP6 476 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 SLC15A5A6NIM6 579 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 MAGEB17A8MXT2 336 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 FFAR2O15552 330 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 OR1I1O60431 355 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 VGLL4Q14135 290 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 LACTB2Q53H82 288 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-201ENST00000355497 PLEKHG4Q58EX7 1191 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 PRAMEF19Q5SWL8 479 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 E9PAM4 449 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 PGAM2P15259 253 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 RPIAP49247 311 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 CRTC2Q53ET0 693 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-201ENST00000355497 KLHL22Q53GT1 634 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 APOBEC3HQ6NTF7 200 aaKnown RBP14.71□□□□□ -0.05
LMX1B-201ENST00000355497 GALNT13Q8IUC8 556 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 MINDY2Q8NBR6 621 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 MTFR1LQ9H019 292 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 KAT8Q9H7Z6 458 aaKnown RBP14.71□□□□□ -0.05
LMX1B-201ENST00000355497 FBXW2Q9UKT8 454 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 CDH7Q9ULB5 785 aa14.71□□□□□ -0.05
LMX1B-201ENST00000355497 A0A1W2PQ67 120 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 NDST3O95803 873 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 GLUD1P00367 558 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 NR4A1P22736 598 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 YAP1P46937 504 aaKnown RBP14.71□□□□□ -0.06
LMX1B-201ENST00000355497 HSPA7P48741 367 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 KHKP50053 298 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 RORCP51449 518 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 CCL23P55773 120 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 EIF5AP63241 154 aaKnown RBP14.71□□□□□ -0.06
LMX1B-201ENST00000355497 SLC1A5Q15758 541 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 ABCA11PQ4W5N1 156 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 CERS6Q6ZMG9 384 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 CXorf21Q9HAI6 301 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 RC3H2Q9HBD1 1191 aaKnown RBP14.71□□□□□ -0.06
LMX1B-201ENST00000355497 PLCL2Q9UPR0 1127 aa14.71□□□□□ -0.06
LMX1B-201ENST00000355497 CXCR6O00574 342 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 CXCL14O95715 111 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 TUBB3Q13509 450 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 IFI44LQ53G44 452 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 SWT1Q5T5J6 900 aaKnown RBP14.7□□□□□ -0.06
LMX1B-201ENST00000355497 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 PSRC1Q6PGN9 363 aaPredicted RBP14.7□□□□□ -0.06
LMX1B-201ENST00000355497 SLIT1O75093 1534 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 OR2AT4A6NND4 320 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 ZNF99A8MXY4 864 aaPredicted RBP14.7□□□□□ -0.06
LMX1B-201ENST00000355497 PDPK1O15530 556 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 CDK14O94921 469 aa14.7□□□□□ -0.06
LMX1B-201ENST00000355497 ZNF12P17014 697 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms