RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 PDCD4Q53EL6 469 aaKnown RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 CTSL3PQ5NE16 218 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 SAMD4BQ5PRF9 694 aaKnown RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 FIG4Q92562 907 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 CXorf21Q9HAI6 301 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TBCCD1Q9NVR7 557 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 POLR3HQ9Y535 204 aaPredicted RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 ST14Q9Y5Y6 855 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ZNF236Q9UL36 1845 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 CCDC154A6NI56 674 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 ANKRD66B4E2M5 251 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 H3BMQ9 156 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 NOBOXO60393 691 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 CLDN7O95471 211 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 CDH3P22223 829 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 GSK3BP49841 420 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 KCNK10P57789 538 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 ZFP1Q6P2D0 407 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
EBF3-201ENST00000355311 RNF180Q86T96 592 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 LSRQ86X29 649 aaPredicted RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 ZC3H7AQ8IWR0 971 aaKnown RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 APCDD1Q8J025 514 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 KRTCAP2Q8N6L1 136 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 PCYOX1LQ8NBM8 494 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 OR2T34Q8NGX1 318 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 OR2T3Q8NH03 318 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 TBC1D15Q8TC07 691 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 CCDC126Q96EE4 140 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 COG8Q96MW5 612 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 KCTD14Q9BQ13 255 aaPredicted RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 LATS2Q9NRM7 1088 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 SLC2A4P14672 509 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 WEE1P30291 646 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 CLCN2P51788 898 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 NUP107P57740 925 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 NR1D2Q14995 579 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 USP41Q3LFD5 358 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 CROCCP3Q8IVE0 287 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 ADGRG2Q8IZP9 1017 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 PTCD2Q8WV60 388 aaKnown RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 PBXIP1Q96AQ6 731 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 PPP1R14BQ96C90 147 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 ALG2Q9H553 416 aa13.61□□□□□ -0.23
EBF3-201ENST00000355311 DUS2Q9NX74 493 aaKnown RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 MBD1Q9UIS9 605 aaPredicted RBP13.61□□□□□ -0.23
EBF3-201ENST00000355311 FGF1P05230 155 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 PAX3P23760 479 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 MLLT10P55197 1068 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 RHOAP61586 193 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 ARF5P84085 180 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 ABRAXAS2Q15018 415 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 CPSF6Q16630 551 aaKnown RBP eCLIP13.6□□□□□ -0.23
EBF3-201ENST00000355311 PTRHD1Q6GMV3 140 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 RAET1EQ8TD07 263 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 C8orf48Q96LL4 319 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 TRIM62Q9BVG3 475 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 EPS8L2Q9H6S3 715 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 ARVCFO00192 962 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 GALTP07902 379 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 MBL2P11226 248 aaPredicted RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 PKMP14618 531 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 ELK4P28324 431 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 STK19P49842 368 aaPredicted RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 RPL38P63173 70 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 LCP2Q13094 533 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 CARM1Q86X55 608 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 Q8N9G6 341 aaPredicted RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 THUMPD3Q9BV44 507 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 HERC2P3Q9BVR0 1158 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 RPF2Q9H7B2 306 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 NANOGQ9H9S0 305 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 SIAEQ9HAT2 523 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 SEPT3Q9UH03 358 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 DNMT3LQ9UJW3 386 aa13.6□□□□□ -0.23
EBF3-201ENST00000355311 FAM32AQ9Y421 112 aaKnown RBP13.6□□□□□ -0.23
EBF3-201ENST00000355311 STC2O76061 302 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 HSPA1AP0DMV8 641 aaKnown RBP13.59□□□□□ -0.23
EBF3-201ENST00000355311 HSPA1BP0DMV9 641 aaKnown RBP13.59□□□□□ -0.23
EBF3-201ENST00000355311 HLA-DPA1P20036 260 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 ZNF135P52742 658 aaPredicted RBP13.59□□□□□ -0.23
EBF3-201ENST00000355311 IL2P60568 153 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 TSTA3Q13630 321 aaPredicted RBP13.59□□□□□ -0.23
EBF3-201ENST00000355311 GPNMBQ14956 572 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 PHKG1Q16816 387 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 CCSAPQ6IQ19 270 aaPredicted RBP13.59□□□□□ -0.23
EBF3-201ENST00000355311 Q6ZSR9 355 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 PHYKPLQ8IUZ5 450 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 TEX26Q8N6G2 289 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 POLR1BQ9H9Y6 1135 aa13.59□□□□□ -0.23
EBF3-201ENST00000355311 MRM3Q9HC36 420 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms