RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ADGRD1Q6QNK2 874 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 TSEN15Q8WW01 171 aaKnown RBP13.07□□□□□ -0.32
SCN8A-202ENST00000355133 POP5Q969H6 163 aaKnown RBP13.07□□□□□ -0.32
SCN8A-202ENST00000355133 RBM18Q96H35 190 aaKnown RBP13.07□□□□□ -0.32
SCN8A-202ENST00000355133 MROH1Q8NDA8 1641 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 IL12AP29459 219 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 SH3PXD2AQ5TCZ1 1133 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 GDF6Q6KF10 455 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-202ENST00000355133 FAM131AQ6UXB0 335 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 SNX20Q7Z614 316 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-202ENST00000355133 LPGAT1Q92604 370 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 TPK1Q9H3S4 243 aa13.07□□□□□ -0.32
SCN8A-202ENST00000355133 FER1L4A9Z1Z3 1794 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 TPST2O60704 377 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CSKP41240 450 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 GPD2P43304 727 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CASP9P55211 416 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CA9Q16790 459 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 TMPRSS11AQ6ZMR5 421 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 OR2AG1Q9H205 316 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 PIGUQ9H490 435 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 PLGRKTQ9HBL7 147 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 S100A14Q9HCY8 104 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CDH22Q9UJ99 828 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 GSC2O15499 205 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 NADKO95544 446 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 METTL18O95568 372 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 PRKAR1AP10644 381 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 ETS2P15036 469 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 ASPAP45381 313 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 ACLYP53396 1101 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 PLA2G16P53816 162 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 POU5F1Q01860 360 aaKnown RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 SULT1C3Q6IMI6 304 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 C12orf66Q96MD2 445 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 A8MUI8 341 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 BCKDKO14874 412 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 DCLK1O15075 740 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 HCN1O60741 890 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 HKDC1Q2TB90 917 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 TIGD5Q53EQ6 642 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 DCST1Q5T197 706 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 RBM15BQ8NDT2 890 aaKnown RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CHID1Q9BWS9 393 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 ARHGEF28Q8N1W1 1705 aaKnown RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 A0A1W2PRU2 124 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 IRGMA1A4Y4 181 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 TBX18O95935 607 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 IFNW1P05000 195 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CHRNB2P17787 502 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CD247P20963 164 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 DPYSQ14117 519 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CLNKQ7Z7G1 428 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 RNF31Q96EP0 1072 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CKLFQ9UBR5 152 aa13.06□□□□□ -0.32
SCN8A-202ENST00000355133 CPSF4LA6NMK7 179 aaKnown RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 PIP5K1BO14986 540 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 PGDP52209 483 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 STXBP1P61764 594 aaKnown RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 SLC30A6Q6NXT4 461 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 LRRC17Q8N6Y2 441 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 ZNF781Q8N8C0 355 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 FAR1Q8WVX9 515 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 DSN1Q9H410 356 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 ABCB9Q9NP78 766 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 SIRPGQ9P1W8 387 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 ITGA3P26006 1051 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 GDF10P55107 478 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 SLC13A2Q13183 592 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 MADCAM1Q13477 382 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 TEAD4Q15561 434 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 CRELD2Q6UXH1 353 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 BRSK1Q8TDC3 778 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 POLE3Q9NRF9 147 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 IL12BP29460 328 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 MNDAP41218 407 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 NRLP54845 237 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 ZNF483Q8TF39 744 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 FADS2P1A8MWK0 482 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 PRODHO43272 600 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 NCK1P16333 377 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 ENPEPQ07075 957 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 NAPRTQ6XQN6 538 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 PCDH19Q8TAB3 1148 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms