RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MTA2O94776 668 aa11□□□□□ -0.65
RTN3-204ENST00000354497 TMEM63AO94886 807 aa11□□□□□ -0.65
RTN3-204ENST00000354497 HSPA9P38646 679 aaKnown RBP11□□□□□ -0.65
RTN3-204ENST00000354497 CAPZBP47756 277 aa11□□□□□ -0.65
RTN3-204ENST00000354497 ITGA1P56199 1179 aa11□□□□□ -0.65
RTN3-204ENST00000354497 RPL7AP62424 266 aaKnown RBP11□□□□□ -0.65
RTN3-204ENST00000354497 INSCQ1MX18 579 aa11□□□□□ -0.65
RTN3-204ENST00000354497 PLEKHN1Q494U1 663 aaPredicted RBP11□□□□□ -0.65
RTN3-204ENST00000354497 ANO6Q4KMQ2 910 aa11□□□□□ -0.65
RTN3-204ENST00000354497 TDRD12Q587J7 1177 aaKnown RBP11□□□□□ -0.65
RTN3-204ENST00000354497 CRTC3Q6UUV7 619 aa11□□□□□ -0.65
RTN3-204ENST00000354497 TRIM72Q6ZMU5 477 aa11□□□□□ -0.65
RTN3-204ENST00000354497 ZNF765Q7L2R6 523 aa11□□□□□ -0.65
RTN3-204ENST00000354497 MYLK4Q86YV6 388 aaPredicted RBP11□□□□□ -0.65
RTN3-204ENST00000354497 HPS6Q86YV9 775 aa11□□□□□ -0.65
RTN3-204ENST00000354497 LRRN4CLQ8ND94 238 aa11□□□□□ -0.65
RTN3-204ENST00000354497 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
RTN3-204ENST00000354497 NSMCE1Q8WV22 266 aa11□□□□□ -0.65
RTN3-204ENST00000354497 ZNF599Q96NL3 588 aa11□□□□□ -0.65
RTN3-204ENST00000354497 RANBP9Q96S59 729 aa11□□□□□ -0.65
RTN3-204ENST00000354497 PCDHB18PQ96TA0 734 aa11□□□□□ -0.65
RTN3-204ENST00000354497 BPIFA3Q9BQP9 254 aa11□□□□□ -0.65
RTN3-204ENST00000354497 TUBGCP2Q9BSJ2 902 aa11□□□□□ -0.65
RTN3-204ENST00000354497 CNPY3Q9BT09 278 aa11□□□□□ -0.65
RTN3-204ENST00000354497 MLPHQ9BV36 600 aaPredicted RBP11□□□□□ -0.65
RTN3-204ENST00000354497 ILKAPQ9H0C8 392 aaPredicted RBP11□□□□□ -0.65
RTN3-204ENST00000354497 RMI1Q9H9A7 625 aa11□□□□□ -0.65
RTN3-204ENST00000354497 SNX7Q9UNH6 387 aa11□□□□□ -0.65
RTN3-204ENST00000354497 DNAJC16Q9Y2G8 782 aa11□□□□□ -0.65
RTN3-204ENST00000354497 A6NHS1 94 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 PRSS44E7EML9 344 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 E2F6O75461 281 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 PDHA1P08559 390 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 EBLN1P0CF75 366 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 FOLR1P15328 257 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 NELFEP18615 380 aaKnown RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 TPP2P29144 1249 aaPredicted RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 PTSQ03393 145 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 CASP8Q14790 479 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 CLEC16AQ2KHT3 1053 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 CMPK2Q5EBM0 449 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 MIIPQ5JXC2 388 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 ZNF648Q5T619 568 aaPredicted RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 FAM69BQ5VUD6 431 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 HGSNATQ68CP4 663 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 SP5Q6BEB4 398 aaPredicted RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 TMEM126BQ8IUX1 230 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 TEX9Q8N6V9 391 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 PIH1D2Q8WWB5 315 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 KLHL6Q8WZ60 621 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 SH3GL2Q99962 352 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 SNRNP25Q9BV90 132 aaKnown RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 UCK1Q9HA47 277 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 TRIM10Q9UDY6 481 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 ENTPD4Q9Y227 616 aa10.99□□□□□ -0.65
RTN3-204ENST00000354497 COPG1Q9Y678 874 aaKnown RBP10.99□□□□□ -0.65
RTN3-204ENST00000354497 SSU72P8A0A1W2PR75 194 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 LRRTM2O43300 516 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 SCRG1O75711 98 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 CEACAM4O75871 244 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 CLDN7O95471 211 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 UNGP13051 313 aaPredicted RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 ZNF30P17039 623 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 XRCC1P18887 633 aaPredicted RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 LPOP22079 712 aaPredicted RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 PSMA2P25787 234 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 SLC19A1P41440 591 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 MMP13P45452 471 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 GLRBP48167 497 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 STC1P52823 247 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 SH3BGRP55822 239 aaPredicted RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 PER3P56645 1201 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 PPP1CAP62136 330 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 ACY1Q03154 408 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 LRRC23Q53EV4 343 aaPredicted RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 CERS6Q6ZMG9 384 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 CCDC80Q76M96 950 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 PARP9Q8IXQ6 854 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 ENDOVQ8N8Q3 282 aaKnown RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 CXorf40BQ96DE9 158 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 RBM41Q96IZ5 413 aaKnown RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 MGME1Q9BQP7 344 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 OR2AG1Q9H205 316 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 CHST8Q9H2A9 424 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 RUBCNLQ9H714 662 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 NT5MQ9NPB1 228 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 NLRC4Q9NPP4 1024 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 WASH6PQ9NQA3 447 aa10.98□□□□□ -0.65
RTN3-204ENST00000354497 ZNF624Q9P2J8 865 aaPredicted RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 CNOT6Q9ULM6 557 aaKnown RBP10.98□□□□□ -0.65
RTN3-204ENST00000354497 C2CD3Q4AC94 2353 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 RP1L1Q8IWN7 2480 aaPredicted RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 IGHV5-51A0A0C4DH38 117 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 FADS2P1A8MWK0 482 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 NUAK1O60285 661 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 URI1O94763 535 aaPredicted RBP10.97□□□□□ -0.65
RTN3-204ENST00000354497 IDO1P14902 403 aa10.97□□□□□ -0.65
RTN3-204ENST00000354497 ZNF8P17098 575 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms