RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SPACA9Q96E40 222 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 DAZAP1Q96EP5 407 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 DTD2Q96FN9 168 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CFAP57Q96MR6 1250 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PANX3Q96QZ0 392 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CMKLR1Q99788 373 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BDH2Q9BUT1 245 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 KRTAP9-8Q9BYQ0 159 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SLC2A11Q9BYW1 496 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SEMA6AQ9H2E6 1030 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 DENND2DQ9H6A0 471 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 Q9N2K0 584 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NOX4Q9NPH5 578 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 STK39Q9UEW8 545 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FBXL5Q9UKA1 691 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 APPL1Q9UKG1 709 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EXOC7Q9UPT5 735 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 LIPT1Q9Y234 373 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CUL7Q14999 1698 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ZCCHC6Q5VYS8 1495 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 A0A0G2JK05 382 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 HTR3EA5X5Y0 456 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM8BA6NDV4 472 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM247A6NEH6 219 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ANKUB1A6NFN9 424 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DBX1A6NMT0 343 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PSMA7O14818 248 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TXNL1O43396 289 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LDB2O43679 373 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SEC22BO75396 215 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CXCL14O95715 111 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CALCAP01258 141 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SMIM18P0DKX4 95 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CCNA2P20248 432 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CD22P20273 847 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 YWHAQP27348 245 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LUMP51884 338 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EVCP57679 992 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ST8SIA6P61647 398 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ASIC1P78348 528 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MRPS34P82930 218 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EFEMP1Q12805 493 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LPIN1Q14693 890 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 USP41Q3LFD5 358 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PLAC9Q5JTB6 97 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 AARS2Q5JTZ9 985 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DNTTIP2Q5QJE6 756 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM63BQ5T3F8 832 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DAB2IPQ5VWQ8 1189 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DUS1LQ6P1R4 473 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CYB5D1Q6P9G0 228 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 KCNV1Q6PIU1 500 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LRIG3Q6UXM1 1119 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PIGWQ7Z7B1 504 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TLK2Q86UE8 772 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LRRC56Q8IYG6 542 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 HACE1Q8IYU2 909 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 LRRC8CQ8TDW0 803 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 APBB2Q92870 758 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 RNF183Q96D59 192 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF503Q96F45 646 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CSF3RQ99062 836 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CPNE1Q99829 537 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EGLN1Q9GZT9 426 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 CYP4F11Q9HBI6 524 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DNAJC4Q9NNZ3 241 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PFDN4Q9NQP4 134 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM184CQ9NVA4 438 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TFCP2L1Q9NZI6 479 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ACTR3BQ9P1U1 418 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 FBXW2Q9UKT8 454 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 EXO1Q9UQ84 846 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ERVK-11Q9UQG0 969 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MAST3O60307 1309 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA31A1Q5TZJ5 1347 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PARD3Q8TEW0 1356 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ATP10DQ9P241 1426 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PRSS51A0A1B0GVH4 220 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 INPPL1O15357 1258 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 GPC4O75487 556 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 FARP2O94887 1054 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 DESP17661 470 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 APOBEC1P41238 236 aaKnown RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 HOXA4Q00056 320 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 GAD2Q05329 585 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SREBF2Q12772 1141 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF284Q2VY69 593 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MIDNQ504T8 468 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TAF1BQ53T94 588 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 C6orf136Q5SQH8 315 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 PRAMEF17Q5VTA0 474 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 NRROSQ86YC3 692 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 ERC1Q8IUD2 1116 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 WDR63Q8IWG1 891 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 RNF168Q8IYW5 571 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 SLC25A41Q8N5S1 370 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 TRIML1Q8N9V2 468 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 L3MBTL4Q8NA19 623 aa1.61□□□□□ -2.15
BRCA1-202ENST00000354071 BCL2L2Q92843 193 aaPredicted RBP1.61□□□□□ -2.15
BRCA1-202ENST00000354071 MAP4K1Q92918 833 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms