RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 BPHLQ86WA6 291 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 HID1Q8IV36 788 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 P3H2Q8IVL5 708 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 FAM20CQ8IXL6 584 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 REM2Q8IYK8 340 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 NATD1Q8N6N6 113 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 BEND7Q8N7W2 519 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PAPD5Q8NDF8 572 aaKnown RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CHCHD6Q9BRQ6 235 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ACAD9Q9H845 621 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 RGS18Q9NS28 235 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 COQ3Q9NZJ6 369 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 OPTCQ9UBM4 332 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TNFSF13BQ9Y275 285 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PCM1Q15154 2024 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 UBA6A0AVT1 1052 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 UPK1AO00322 258 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CLDN5O00501 218 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 NCAM2O15394 837 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PSMD3O43242 534 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TSC22D2O75157 780 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 KATNA1O75449 491 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 KRT6AP02538 564 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 KRT6BP04259 564 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 LMO2P25791 158 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ADRA1BP35368 520 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SLC26A2P50443 739 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CLCNKBP51801 687 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PRKG2Q13237 762 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 LY6KQ17RY6 165 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 BCL7AQ4VC05 210 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SLX4IPQ5VYV7 408 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PTRH1Q86Y79 214 aaKnown RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 RAB43Q86YS6 212 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CCDC28AQ8IWP9 274 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 UBE2J2Q8N2K1 259 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TMEM199Q8N511 208 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 BHMTQ93088 406 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 WNT8BQ93098 351 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF300Q96RE9 604 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PCYT2Q99447 389 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 FDXACB1Q9BRP7 624 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TAS2R9Q9NYW1 312 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF639Q9UID6 485 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 KLHL20Q9Y2M5 609 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 IPPQ9Y573 584 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PCDHB14Q9Y5E9 798 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 MAU2Q9Y6X3 613 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 OR51F1A6NGY5 319 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 DCLK1O15075 740 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SCO2O43819 266 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TMCC2O75069 709 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TSPAN9O75954 239 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ANXA9O76027 345 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF682O95780 498 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 GRIK1P39086 918 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SLC15A1P46059 708 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CHRNEQ04844 493 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 FCHO2Q0JRZ9 810 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 NXNL2Q5VZ03 156 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF517Q6ZMY9 492 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 B3GNT8Q7Z7M8 397 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ATPAF2Q8N5M1 289 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 C2CD4AQ8NCU7 369 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 OR6F1Q8NGZ6 308 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 GRPEL2Q8TAA5 225 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 RASSF5Q8WWW0 418 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 EDEM1Q92611 657 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SNX18Q96RF0 628 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ASB7Q9H672 318 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 EXOSC4Q9NPD3 245 aaKnown RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CRNNQ9UBG3 495 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PCDHGB6Q9Y5F9 930 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 GOLGB1Q14789 3259 aaKnown RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PNMA8CA0A1B0GUJ8 204 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 FAM92AA1XBS5 289 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 UNCXA6NJT0 531 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 HAT1O14929 419 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 HPRP00739 348 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 GADD45AP24522 165 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 IL12RB1P42701 662 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 POLD2P49005 469 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 CLCN5P51795 746 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 GALK2Q01415 458 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 TARBP2Q15633 366 aaKnown RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 SOWAHCQ53LP3 525 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF691Q5VV52 312 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ERAP2Q6P179 960 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 PNCKQ6P2M8 343 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 GCNT7Q6ZNI0 430 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 HFE2Q6ZVN8 426 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ISCA2Q86U28 154 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 RIMKLAQ8IXN7 391 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 TCAIMQ8N3R3 496 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 FBXO39Q8N4B4 442 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 ATG16L2Q8NAA4 619 aa7.53□□□□□ -1.2
BRCA1-201ENST00000352993 IL17RDQ8NFM7 739 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms