RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RMND5BQ96G75 393 aaPredicted RBP21.82■■□□□ 1.08
UPF3A-201ENST00000351487 SCLYQ96I15 445 aa21.82■■□□□ 1.08
UPF3A-201ENST00000351487 CIPCQ9C0C6 399 aa21.82■■□□□ 1.08
UPF3A-201ENST00000351487 SLAMF8Q9P0V8 285 aa21.82■■□□□ 1.08
UPF3A-201ENST00000351487 GNPTGQ9UJJ9 305 aa21.82■■□□□ 1.08
UPF3A-201ENST00000351487 PLOD2O00469 737 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 LSM1O15116 133 aaKnown RBP21.81■■□□□ 1.08
UPF3A-201ENST00000351487 OTCP00480 354 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 GNRH1P01148 92 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 S100BP04271 92 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-201ENST00000351487 TUBA4AP68366 448 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 TRAF3Q13114 568 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.81■■□□□ 1.08
UPF3A-201ENST00000351487 IL27RAQ6UWB1 636 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 FAM151BQ6UXP7 276 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 IFNEQ86WN2 208 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 FIBCD1Q8N539 461 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 CCDC97Q96F63 343 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-201ENST00000351487 LRRC3Q9BY71 257 aa21.81■■□□□ 1.08
UPF3A-201ENST00000351487 PTBP2Q9UKA9 531 aaKnown RBP21.81■■□□□ 1.08
UPF3A-201ENST00000351487 TRBV5-4A0A0C4DH59 114 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 FAM149AA5PLN7 773 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 ARNTLO00327 626 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 RFC2P35250 354 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 RGS4P49798 205 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 C18orf21Q32NC0 220 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-201ENST00000351487 TMTC4Q5T4D3 741 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 SNX20Q7Z614 316 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 DNAJB7Q7Z6W7 309 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-201ENST00000351487 HID1Q8IV36 788 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 FAM217AQ8IXS0 508 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 TMEM74Q96NL1 305 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 ACTL8Q9H568 366 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 ZFYVE1Q9HBF4 777 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 SMOXQ9NWM0 555 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 OARD1Q9Y530 152 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 IFRD1O00458 451 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-201ENST00000351487 ANKRD28O15084 1053 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 TPST1O60507 370 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 RASAL1O95294 804 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 OLFM2O95897 454 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 ALDH3B2P48448 385 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 NFATC2Q13469 925 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 FUT11Q495W5 492 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 PROSER1Q86XN7 944 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 TBC1D21Q8IYX1 336 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 FAM47BQ8NA70 645 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 DIS3LQ8TF46 1054 aaKnown RBP21.8■■□□□ 1.08
UPF3A-201ENST00000351487 SLC22A12Q96S37 553 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 TM6SF2Q9BZW4 377 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 ANAPC2Q9UJX6 822 aa21.8■■□□□ 1.08
UPF3A-201ENST00000351487 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 K7ERQ8 282 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 SCAMP3O14828 347 aaKnown RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 ACOX3O15254 700 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 TRBC1P01850 177 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 MYF6P23409 242 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 PLOD1Q02809 727 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 CYP20A1Q6UW02 462 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 DLEU7Q6UYE1 221 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 RNF165Q6ZSG1 346 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 REM2Q8IYK8 340 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 LKAAEAR1Q8TD35 194 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 ADI1Q9BV57 179 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 C2orf49Q9BVC5 232 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 BOCQ9BWV1 1114 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 THEGQ9P2T0 379 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 PIKFYVEQ9Y2I7 2098 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 PDLIM1O00151 329 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 NCK1P16333 377 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 MSH3P20585 1137 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 ITGALP20701 1170 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 JAK1P23458 1154 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 CASP2P42575 452 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 NR6A1Q15406 480 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 CDKN3Q16667 212 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 KCTD21Q4G0X4 260 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 RETSATQ6NUM9 610 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 SLC2A7Q6PXP3 512 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 FAM126AQ9BYI3 521 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 NSUN3Q9H649 340 aaKnown RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 ASB8Q9H765 288 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 CAAP1Q9H8G2 361 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 IPPKQ9H8X2 491 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 CLK4Q9HAZ1 481 aaKnown RBP21.79■■□□□ 1.08
UPF3A-201ENST00000351487 OAZ3Q9UMX2 235 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 SLC8A2Q9UPR5 921 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 CCL27Q9Y4X3 112 aa21.79■■□□□ 1.08
UPF3A-201ENST00000351487 C1orf232A0A0U1RR37 186 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 SOCS5O75159 536 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 G6PDP11413 515 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 DGKAP23743 735 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 HRH2P25021 359 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 CA5AP35218 305 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 ARL1P40616 181 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-201ENST00000351487 MAPK8P45983 427 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 CSNK1DP48730 415 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 ZXDBP98169 803 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 MPP4Q96JB8 637 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 RPF2Q9H7B2 306 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms