RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CYB561D2O14569 222 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 PAPSS1O43252 624 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ASNA1O43681 348 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 JRKO75564 520 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 STAM2O75886 525 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 DNAJB5O75953 348 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 VAPBO95292 243 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CPNE6O95741 557 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 HSPA4LO95757 839 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CFBP00751 764 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ERBB2P04626 1255 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 KRT7P08729 469 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ENO3P13929 434 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 GABRB3P28472 473 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 HPCAL1P37235 193 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 GARSP41250 739 aaKnown RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ACADSBP45954 432 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SERPINB10P48595 397 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 PRKAA2P54646 552 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SNAP25P60880 206 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 RPL10AP62906 217 aaKnown RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 NOMO3P69849 1222 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 BASP1P80723 227 aaKnown RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 RHDQ02161 417 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CNTN2Q02246 1040 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 GNA12Q03113 381 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 GAD2Q05329 585 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SELENBP1Q13228 472 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 PMS2P3Q13401 168 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CEACAM7Q14002 265 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 KCNJ11Q14654 390 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ARHGEF6Q15052 776 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SF3B4Q15427 424 aaKnown RBP eCLIP7.64□□□□□ -1.193e-70■■■■■ 60.5
UBE2D3-204ENST00000349311 NRF1Q16656 503 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 HADHQ16836 314 aaKnown RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 AASDHQ4L235 1098 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 NHSL2Q5HYW2 709 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 PPM1LQ5SGD2 360 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 N4BP2L1Q5TBK1 243 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ZNF773Q6PK81 442 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ZCCHC23Q6ZST2 131 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 KCTD8Q6ZWB6 473 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 MAVSQ7Z434 540 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 LACC1Q8IV20 430 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CCDC60Q8IWA6 550 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ABRAQ8N0Z2 381 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 LSMEM2Q8N112 164 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 MYO1HQ8N1T3 1032 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 NIPA2Q8N8Q9 360 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CHST13Q8NET6 341 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 OR13F1Q8NGS4 319 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ACTL9Q8TC94 416 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CAPSLQ8WWF8 208 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SEPT8Q92599 483 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 HOXB13Q92826 284 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 EDAQ92838 391 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 TANKQ92844 425 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SEMA4DQ92854 862 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 TRIM63Q969Q1 353 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 CLIP3Q96DZ5 547 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 KLHL32Q96NJ5 620 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 LENG8Q96PV6 779 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SORT1Q99523 831 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SHCBP1LQ9BZQ2 653 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 OR2B2Q9GZK3 357 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 C20orf27Q9GZN8 174 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 HOXD1Q9GZZ0 328 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 UPF3AQ9H1J1 476 aaKnown RBP7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 ST6GALNAC4Q9H4F1 302 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SP140LQ9H930 580 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 NANOGQ9H9S0 305 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SIAEQ9HAT2 523 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 TCF7L2Q9NQB0 619 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 XPNPEP1Q9NQW7 623 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 GDAP2Q9NXN4 497 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 PAK5Q9P286 719 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SLC45A1Q9Y2W3 748 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 SPEF1Q9Y4P9 236 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 GPR45Q9Y5Y3 372 aa7.64□□□□□ -1.19
UBE2D3-204ENST00000349311 TCRBV3S1A0A5B6 114 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 HEATR9A2RTY3 570 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 ISPDA4D126 451 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 TMEM191CA6NGB0 347 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 FAM86B1E9PN63 330 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 ACOX3O15254 700 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 MSH4O15457 936 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 CLOCKO15516 846 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 CFLARO15519 480 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 ZBTB14O43829 449 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 PSMD10O75832 226 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 ZMPSTE24O75844 475 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 SEC14L2O76054 403 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 C1QAP02745 245 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 UGT2B4P06133 528 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 FAM86B2P0C5J1 330 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 TMEM191BP0C7N4 346 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 HSPA1AP0DMV8 641 aaKnown RBP7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 HSPA1BP0DMV9 641 aaKnown RBP7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 TGM1P22735 817 aa7.63□□□□□ -1.19
UBE2D3-204ENST00000349311 HOXA13P31271 388 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms