RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MYO1DO94832 1006 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 NDST3O95803 873 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 EFEMP2O95967 443 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GSNP06396 782 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ARSAP15289 507 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SLC11A1P49279 550 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 PPP5CP53041 499 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 MAPK10P53779 464 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GPR17Q13304 367 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 HIST2H2ACQ16777 129 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TCTN1Q2MV58 587 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TRIM60Q495X7 471 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SLC39A12Q504Y0 691 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 FAM171A1Q5VUB5 890 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 FUT10Q6P4F1 479 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TBPL2Q6SJ96 375 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 CTU1Q7Z7A3 348 aaKnown RBP15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ADCK1Q86TW2 530 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ISCA2Q86U28 154 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 STK32CQ86UX6 486 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ATPAF2Q8N5M1 289 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SCLYQ96I15 445 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 CCDC115Q96NT0 180 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 FSD1LQ9BXM9 530 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TPK1Q9H3S4 243 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 EPS8L2Q9H6S3 715 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 PAK1IP1Q9NWT1 392 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SCML2Q9UQR0 700 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ANKRD36A6QL64 1941 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 FAM92AA1XBS5 289 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 MATN3O15232 486 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 CHEK2O96017 543 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 CYBBP04839 570 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 HRH2P25021 359 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 PLK1P53350 603 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ATN1P54259 1190 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-202ENST00000347617 CCL23P55773 120 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SH3BP2P78314 561 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 MVKQ03426 396 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GRB7Q14451 532 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GEN1Q17RS7 908 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 BRMS1LQ5PSV4 323 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GLYATQ6IB77 296 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 RANBP10Q6VN20 620 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 AKAP14Q86UN6 197 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ITIH5Q86UX2 942 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 MON1AQ86VX9 555 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 LGI2Q8N0V4 545 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 OR52E4Q8NGH9 312 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 DNAJB14Q8TBM8 379 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GIPC2Q8TF65 315 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SEPHS2Q99611 448 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 OSBPL10Q9BXB5 764 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 GPR62Q9BZJ7 368 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TOR3AQ9H497 397 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TFB2MQ9H5Q4 396 aaKnown RBP15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SOX17Q9H6I2 414 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ALG9Q9H6U8 611 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 POLG2Q9UHN1 485 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SLC27A5Q9Y2P5 690 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 ST14Q9Y5Y6 855 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 HSPE1-MOB4S4R3N1 261 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 TET1Q8NFU7 2136 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 ABHD14A-ACY1A0A1B0GW23 586 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 TBKBP1A7MCY6 615 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 G3V2T6 193 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 TAF4O00268 1085 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 FGF10O15520 208 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 EFCAB14O75071 495 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 SLC22A3O75751 556 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 PCMT1P22061 227 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 IL12AP29459 219 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 PHC1P78364 1004 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 LCP2Q13094 533 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 SELENBP1Q13228 472 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 ZNF181Q2M3W8 571 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 ZIK1Q3SY52 487 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 OTUD3Q5T2D3 398 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 IFNEQ86WN2 208 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 MMAAQ8IVH4 418 aaKnown RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 PTGR2Q8N8N7 351 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 SETD9Q8NE22 299 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 RORBQ92753 470 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 ISG20Q96AZ6 181 aaKnown RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 CCDC97Q96F63 343 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 SPATA17Q96L03 361 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 MFSD1Q9H3U5 465 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 WDCPQ9H6R7 721 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 DDIT4Q9NX09 232 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 DNMT3BQ9UBC3 853 aaKnown RBP15.66■□□□□ 0.1
HMGA1-202ENST00000347617 OR12D3Q9UGF7 316 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 SLC2A6Q9UGQ3 507 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 C3orf18Q9UK00 162 aa15.66■□□□□ 0.1
HMGA1-202ENST00000347617 ARNTLO00327 626 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 SLC1A7O00341 560 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 NADKO95544 446 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-202ENST00000347617 MT-CO1P00395 513 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms