RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PWWP2AQ96N64 755 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 PANX3Q96QZ0 392 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 FMO2Q99518 471 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 RHOXF2Q9BQY4 288 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 BOCQ9BWV1 1114 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 WASH6PQ9NQA3 447 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 NSMCE4AQ9NXX6 385 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 ZFATQ9P243 1243 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 PADI4Q9UM07 663 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 APOBEC2Q9Y235 224 aaKnown RBP11.64□□□□□ -0.55
SNCA-202ENST00000345009 KCNK6Q9Y257 313 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 BTBD3Q9Y2F9 522 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 COMMD10Q9Y6G5 202 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 SCN8AQ9UQD0 1980 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 KNTC1P50748 2209 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 ARHGEF17Q96PE2 2063 aaPredicted RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 UBA6A0AVT1 1052 aaPredicted RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 B4DGG1 531 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 GOLGA8KD6RF30 607 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 GOLGA8TH3BQL2 631 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 BANF1O75531 89 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CELA2BP08218 269 aaPredicted RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 PRSS56P0CW18 603 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 ERVK-10P10266 1014 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CKMT1AP12532 417 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 F3P13726 295 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 RPS3P23396 243 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNCA-202ENST00000345009 ID4P47928 161 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CTSCP53634 463 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 DMPKQ09013 629 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 MGAT5Q09328 741 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 RPA4Q13156 261 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 SLMAPQ14BN4 828 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 TRADDQ15628 312 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 TYSND1Q2T9J0 566 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 PLA2G4EQ3MJ16 856 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 AGAP9Q5VTM2 703 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 METRNLQ641Q3 311 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 OGFOD3Q6PK18 319 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 ZDHHC24Q6UX98 284 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 C3orf62Q6ZUJ4 267 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CYS1Q717R9 158 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 GLRX5Q86SX6 157 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 SLC9B2Q86UD5 537 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 NRROSQ86YC3 692 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 IGDCC3Q8IVU1 814 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CFAP206Q8IYR0 622 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 EIF1ADQ8N9N8 165 aaKnown RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 HM13Q8TCT9 377 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 MAPK15Q8TD08 544 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNCA-202ENST00000345009 SH3KBP1Q96B97 665 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 THAP11Q96EK4 314 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 CAMK1GQ96NX5 476 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 TRIM56Q9BRZ2 755 aaKnown RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 IARS2Q9NSE4 1012 aaKnown RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 ZDHHC18Q9NUE0 388 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 SPATS2LQ9NUQ6 558 aaKnown RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 SIRPGQ9P1W8 387 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 MARCH4Q9P2E8 410 aaPredicted RBP11.63□□□□□ -0.55
SNCA-202ENST00000345009 TXNDC16Q9P2K2 825 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 FBXO5Q9UKT4 447 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 SPTBN2O15020 2390 aa11.63□□□□□ -0.55
SNCA-202ENST00000345009 TP53BP1Q12888 1972 aaPredicted RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 RHPN2P1A8MT19 583 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 IFRD1O00458 451 aaPredicted RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 LIN7AO14910 233 aaPredicted RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 OR1I1O60431 355 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 KCNK5O95279 499 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 TRIM16O95361 564 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 APOA4P06727 396 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 GP1BAP07359 652 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 SLC35G4P0C7Q5 338 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 GLB1P16278 677 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 MCM3P25205 808 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 PBLDP30039 288 aaPredicted RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 STX2P32856 288 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 CA5AP35218 305 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 PHBP35232 272 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 CARSP49589 748 aaKnown RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 EIF3BP55884 814 aaKnown RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 SIM1P81133 766 aaPredicted RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 E2F1Q01094 437 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 TMED2Q15363 201 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 SYTL3Q4VX76 610 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 C14orf28Q4W4Y0 310 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 IYDQ6PHW0 289 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 ABRAXAS1Q6UWZ7 409 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 C11orf96Q7Z7L8 435 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 LDB1Q86U70 411 aaPredicted RBP11.62□□□□□ -0.55
SNCA-202ENST00000345009 TRIM48Q8IWZ4 208 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 ASZ1Q8WWH4 475 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 ELMO1Q92556 727 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 UBXN4Q92575 508 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms