RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLC39A3Q9BRY0 314 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 SLC25A51Q9H1U9 297 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 TFB2MQ9H5Q4 396 aaKnown RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 ZIM2Q9NZV7 527 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 MYOCOSA0A1B0GUC4 107 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 RBM47A0AV96 593 aaKnown RBP17.85■□□□□ 0.45
SMC4-201ENST00000344722 IL1BP01584 269 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 IL7RP16871 459 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 CDH4P55283 916 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 TATDN1Q6P1N9 297 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 PYROXD2Q8N2H3 581 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 KLHL5Q96PQ7 755 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 RPL36Q9Y3U8 105 aaKnown RBP17.85■□□□□ 0.45
SMC4-201ENST00000344722 CACNA1FO60840 1977 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 OR6A2O95222 327 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 TNNI3P19429 210 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 SLC6A4P31645 630 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 PITPNAQ00169 270 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 IFI44LQ53G44 452 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 CXorf57Q6NSI4 855 aaKnown RBP17.85■□□□□ 0.45
SMC4-201ENST00000344722 C16orf59Q7L2K0 433 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMC4-201ENST00000344722 C10orf71Q711Q0 1435 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 MATN3O15232 486 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 ATP4BP51164 291 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 MADCAM1Q13477 382 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 MEP1AQ16819 746 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 FAM174BQ3ZCQ3 159 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 OLFML2AQ68BL7 652 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 ANKRD13BQ86YJ7 626 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 FRMD6Q96NE9 622 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 FCRL4Q96PJ5 515 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 AAASQ9NRG9 546 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 MAGEB17A8MXT2 336 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 DYRK3O43781 588 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 DLX3O60479 287 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 KPNA6O60684 536 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 STK16O75716 305 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 RFTN2Q52LD8 501 aaPredicted RBP17.85■□□□□ 0.45
SMC4-201ENST00000344722 KLHL22Q53GT1 634 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 BIRC7Q96CA5 298 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 MED11Q9P086 117 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 AGO1Q9UL18 857 aaKnown RBP17.85■□□□□ 0.45
SMC4-201ENST00000344722 KCNE2Q9Y6J6 123 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 RIMS1Q86UR5 1692 aaKnown RBP17.85■□□□□ 0.45
SMC4-201ENST00000344722 ZNF879B4DU55 563 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 VNN1O95497 513 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 PEPDP12955 493 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 GAD2Q05329 585 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 C9orf57Q5W0N0 161 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 SPATA22Q8NHS9 363 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 RFKQ969G6 155 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 PHOX2BQ99453 314 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 SEMA3GQ9NS98 782 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 TBC1D14Q9P2M4 693 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 COMMD3Q9UBI1 195 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 EBF1Q9UH73 591 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 ABCG2Q9UNQ0 655 aa17.85■□□□□ 0.45
SMC4-201ENST00000344722 A8MT66 165 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 A8MX80 341 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 RASAL1O95294 804 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 ARL4DP49703 201 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 VBP1P61758 197 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.84■□□□□ 0.451e-13■■■■■ 65.9
SMC4-201ENST00000344722 LDB1Q86U70 411 aaPredicted RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 CLP1Q92989 425 aaKnown RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 TBATAQ96M53 351 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 C1QTNF1Q9BXJ1 281 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 POLR2J2Q9GZM3 115 aaKnown RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 DSN1Q9H410 356 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 INTS7Q9NVH2 962 aaKnown RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 RNF6Q9Y252 685 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 HOXA2O43364 376 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 RFPL1O75677 317 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 RXRBP28702 533 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 L1CAMP32004 1257 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 SLC9A3P48764 834 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 CD97P48960 835 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 UBE2R2Q712K3 238 aaPredicted RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 GTPBP3Q969Y2 492 aaKnown RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 CGREF1Q99674 301 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 ARL2P36404 184 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 EPHB3P54753 998 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 TMEM132BQ14DG7 1078 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 MAP10Q9P2G4 905 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 TUFMP49411 452 aaKnown RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 CHPFQ8IZ52 775 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 C1orf127Q8N9H9 656 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 OR4K2Q8NGD2 314 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 SLC45A3Q96JT2 553 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 PGLYRP2Q96PD5 576 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 C2orf49Q9BVC5 232 aaPredicted RBP17.84■□□□□ 0.45
SMC4-201ENST00000344722 CLEC4AQ9UMR7 237 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 GIT1Q9Y2X7 761 aa17.84■□□□□ 0.45
SMC4-201ENST00000344722 FAM25EA8MYX2 175 aa17.83■□□□□ 0.45
SMC4-201ENST00000344722 PLOD2O00469 737 aa17.83■□□□□ 0.45
SMC4-201ENST00000344722 RNASEH2AO75792 299 aaKnown RBP17.83■□□□□ 0.45
SMC4-201ENST00000344722 NBPF12Q5TAG4 269 aaPredicted RBP17.83■□□□□ 0.45
SMC4-201ENST00000344722 TXNRD3NBQ6F5E7 133 aa17.83■□□□□ 0.45
SMC4-201ENST00000344722 PLEKHH3Q7Z736 793 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms