RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 MYO1HQ8N1T3 1032 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 AGAP11Q8TF27 550 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 ZNF483Q8TF39 744 aaPredicted RBP13.35□□□□□ -0.27
CDC42-202ENST00000344548 GLYATL1Q969I3 302 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 ULK4Q96C45 1275 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 ZSCAN5AQ9BUG6 496 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 ZNF385DQ9H6B1 395 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 EML4Q9HC35 981 aaKnown RBP13.35□□□□□ -0.27
CDC42-202ENST00000344548 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
CDC42-202ENST00000344548 VTI1BQ9UEU0 232 aa13.35□□□□□ -0.27
CDC42-202ENST00000344548 PCYT1BQ9Y5K3 369 aaPredicted RBP13.35□□□□□ -0.27
CDC42-202ENST00000344548 MYO10Q9HD67 2058 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 B2RBV5 119 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 STX16-NPEPL1H3BU86 382 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 STX16O14662 325 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 MTHFRP42898 656 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 SATB1Q01826 763 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 GBX1Q14549 363 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 ZNF284Q2VY69 593 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
CDC42-202ENST00000344548 ANKS6Q68DC2 871 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 PLA2G15Q8NCC3 412 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 RBM15BQ8NDT2 890 aaKnown RBP13.34□□□□□ -0.27
CDC42-202ENST00000344548 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 LENG8Q96PV6 779 aaPredicted RBP13.34□□□□□ -0.27
CDC42-202ENST00000344548 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 TRMOQ9BU70 441 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 MKRN2Q9H000 416 aaKnown RBP13.34□□□□□ -0.27
CDC42-202ENST00000344548 EPS15L1Q9UBC2 864 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 FADS3Q9Y5Q0 445 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 ATP5HO75947 161 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 OR56A5P0C7T3 313 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 HSPA7P48741 367 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 RGS4P49798 205 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 KLF10Q13118 480 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 CKAP5Q14008 2032 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 CYB5D1Q6P9G0 228 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 FRA10AC1Q70Z53 315 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 RAB44Q7Z6P3 723 aaPredicted RBP13.34□□□□□ -0.27
CDC42-202ENST00000344548 HMGCLL1Q8TB92 370 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 TMEM79Q9BSE2 394 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 BTBD10Q9BSF8 475 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 HGH1Q9BTY7 390 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 MEAF6Q9HAF1 191 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 HEBP1Q9NRV9 189 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 KCTD5Q9NXV2 234 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 BTRCQ9Y297 605 aa13.34□□□□□ -0.27
CDC42-202ENST00000344548 CFAP73A6NFT4 308 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 C2CD4DB7Z1M9 353 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 H0Y858 1186 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 GSC2O15499 205 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 TSPAN6O43657 245 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 SNX2O60749 519 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 EGFP01133 1207 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 FGF4P08620 206 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 TMEM115Q12893 351 aaPredicted RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 LCP2Q13094 533 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 TMEM196Q5HYL7 178 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 AGBL4Q5VU57 503 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 SCIMPQ6UWF3 145 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 DCUN1D1Q96GG9 259 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 SLC45A3Q96JT2 553 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 PANX3Q96QZ0 392 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 PTBP2Q9UKA9 531 aaKnown RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 OARD1Q9Y530 152 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 COPG1Q9Y678 874 aaKnown RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 PSMD11O00231 422 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 ADAM23O75077 832 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 MSH3P20585 1137 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 CTHP32929 405 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 CPOXP36551 454 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 HK2P52789 917 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 ERVPABLB-1P60509 514 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 CAMK2GQ13555 558 aaPredicted RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 CST6Q15828 149 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 METTL21CQ5VZV1 264 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 KANK2Q63ZY3 851 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 CLYBLQ8N0X4 340 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 PDPRQ8NCN5 879 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 DTX3LQ8TDB6 740 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 RHBDF1Q96CC6 855 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 NUS1Q96E22 293 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 VPS35Q96QK1 796 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 FAM126AQ9BYI3 521 aaPredicted RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.28
CDC42-202ENST00000344548 NUDT4Q9NZJ9 180 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 PDE10AQ9Y233 779 aa13.33□□□□□ -0.28
CDC42-202ENST00000344548 TRPM6Q9BX84 2022 aa13.32□□□□□ -0.28
CDC42-202ENST00000344548 USP34Q70CQ2 3546 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms