RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 WSCD1Q658N2 575 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RASAL3Q86YV0 1011 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OR8J3Q8NGG0 315 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FBXL8Q96CD0 374 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SEMA3CQ99985 751 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TOP3BO95985 862 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PTGS2P35354 604 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ATP5C1P36542 298 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 NRLP54845 237 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MAXP61244 160 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 LCN8Q6JVE9 175 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SAMD7Q7Z3H4 446 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CCDC36Q8IYA8 594 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SCML4Q8N228 414 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CHCHD6Q9BRQ6 235 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 VRTNQ9H8Y1 702 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 USP29Q9HBJ7 922 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FAM118AQ9NWS6 357 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RIMS3Q9UJD0 308 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 DNMT3LQ9UJW3 386 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PCDHB5Q9Y5E4 795 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GRIN3BO60391 1043 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PTTG1O95997 202 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PGRP06401 933 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MYBPC1Q00872 1141 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CPSF6Q16630 551 aaKnown RBP eCLIP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MEIOBQ8N635 442 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 NPLQ9BXD5 320 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GPN1Q9HCN4 374 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TRPV5Q9NQA5 729 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SYNDIG1LA6NDD5 238 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PSIP1O75475 530 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 AP2A2O94973 939 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SEMA3DO95025 777 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PRG2P13727 222 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ATF6P18850 670 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OGNP20774 298 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SERPINA4P29622 427 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FAUP35544 74 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FAM174BQ3ZCQ3 159 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 COQ5Q5HYK3 327 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PLD6Q8N2A8 252 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OR52L1Q8NGH7 329 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 NARS2Q96I59 477 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FRMD6Q96NE9 622 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PARK7Q99497 189 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SEZ6LQ9BYH1 1024 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TPK1Q9H3S4 243 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ABHD16BQ9H3Z7 469 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ZFYVE1Q9HBF4 777 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ATP13A1Q9HD20 1204 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TMPRSS4Q9NRS4 437 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ERVK-11Q9UQG0 969 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 IRAK3Q9Y616 596 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SPACA6W5XKT8 324 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 COL2A1P02458 1487 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CXCL11O14625 94 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 KERAO60938 352 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SORBS2O94875 1100 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GOT2P00505 430 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TFAP2AP05549 437 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TYMPP19971 482 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MAPK12P53778 367 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MTPNP58546 118 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OGDHQ02218 1023 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 BOP1Q14137 746 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 XKR6Q5GH73 641 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 STEAP4Q687X5 459 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 NANOGP8Q6NSW7 305 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SPATA22Q8NHS9 363 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 HASPINQ8TF76 798 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GAB3Q8WWW8 586 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 KLHL31Q9H511 634 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MAGIXQ9H6Y5 334 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 NANOGQ9H9S0 305 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 POPDC3Q9HBV1 291 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM181Q9P2C4 612 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ST3GAL5Q9UNP4 418 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 BAIAP2Q9UQB8 552 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ST14Q9Y5Y6 855 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PRORSD1PA6NEY8 169 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 IFNA7P01567 189 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 LGALS2P05162 132 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CTSHP09668 335 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CLCA4Q14CN2 919 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 CHCHD4Q8N4Q1 142 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 OR4A15Q8NGL6 344 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 RHEBL1Q8TAI7 183 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 TEX47Q8TBZ9 253 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 QRFPRQ96P65 431 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PTGFRNQ9P2B2 879 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 LYVE1Q9Y5Y7 322 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 MTHFD1P11586 935 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ANXA8P13928 327 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 RCVRNP35243 200 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PBX3P40426 434 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 ALDH7A1P49419 539 aaKnown RBP4.72□□□□□ -1.65
CSMD3-203ENST00000343508 PTPN5P54829 565 aa4.72□□□□□ -1.65
CSMD3-203ENST00000343508 INCA1Q0VD86 236 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms