RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PPP2R2BQ00005 443 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 FOXM1Q08050 763 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 MADCAM1Q13477 382 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 CRY1Q16526 586 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 SYVN1Q86TM6 617 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 OR2T12Q8NG77 320 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 NT5C3BQ969T7 300 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 YIPF6Q96EC8 236 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 BEX2Q9BXY8 128 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 OPTCQ9UBM4 332 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 ZNF221Q9UK13 617 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 ORC6Q9Y5N6 252 aa14.68□□□□□ -0.06
CLCN1-201ENST00000343257 KATNA1O75449 491 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 GJB3O75712 270 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 RECQL4O94761 1208 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 OR4F21O95013 312 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 DNAJB1P25685 340 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CD86P42081 329 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 GALNT1Q10472 559 aaPredicted RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 TSNQ15631 228 aaKnown RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 GTDC1Q4AE62 458 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 ZNF691Q5VV52 312 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 WSCD1Q658N2 575 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 PAQR9Q6ZVX9 377 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CRYBG2Q8N1P7 616 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 PROKR1Q8TCW9 393 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 RBM4BQ9BQ04 359 aaKnown RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 RBM4Q9BWF3 364 aaKnown RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 IKZF5Q9H5V7 419 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 NECTIN3Q9NQS3 549 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 QPCTLQ9NXS2 382 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 HOXC10Q9NYD6 342 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 VAPAQ9P0L0 249 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 DNAJB9Q9UBS3 223 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 C3orf18Q9UK00 162 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CENPFP49454 3210 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CDC7O00311 574 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 S1PR4O95977 384 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 G6PDP11413 515 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CCR1P32246 355 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 PIK3CGP48736 1102 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 ARPP19P56211 112 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 GABARAPL2P60520 117 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 ZNF549Q6P9A3 640 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 FKBP9P1Q75LS8 142 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 OR7G1Q8NGA0 311 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 PHF10Q8WUB8 498 aaKnown RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 DEPDC7Q96QD5 511 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 FCRL5Q96RD9 977 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CITED4Q96RK1 184 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 TMEM246Q9BRR3 403 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 PRRG3Q9BZD7 231 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 MOV10Q9HCE1 1003 aaKnown RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CNGB3Q9NQW8 809 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 TMEM30AQ9NV96 361 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 NAT1P18440 290 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 DCTP40126 519 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CYP4F2P78329 520 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CYP4F3Q08477 520 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 ZNF404Q494X3 552 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 ATAD3CQ5T2N8 411 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 NXNL2Q5VZ03 156 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 CES5AQ6NT32 575 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 GCNT7Q6ZNI0 430 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 DCP2Q8IU60 420 aaKnown RBP14.67□□□□□ -0.06
CLCN1-201ENST00000343257 SVOPQ8N4V2 548 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 AS3MTQ9HBK9 375 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 GIMAP4Q9NUV9 329 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 ASB1Q9Y576 335 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 SNX8Q9Y5X2 465 aa14.67□□□□□ -0.06
CLCN1-201ENST00000343257 TFECO14948 347 aaPredicted RBP14.66□□□□□ -0.06
CLCN1-201ENST00000343257 CD4P01730 458 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 CYP11A1P05108 521 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 SOX4Q06945 474 aaPredicted RBP14.66□□□□□ -0.06
CLCN1-201ENST00000343257 TOP3AQ13472 1001 aaPredicted RBP14.66□□□□□ -0.06
CLCN1-201ENST00000343257 TP53BP2Q13625 1128 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 DLK2Q6UY11 383 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 GALNT10Q86SR1 603 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 EID3Q8N140 333 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 BLOC1S5Q8TDH9 187 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 ZNF583Q96ND8 569 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 UGT2B28Q9BY64 529 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 MUC13Q9H3R2 512 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 KAT8Q9H7Z6 458 aaKnown RBP14.66□□□□□ -0.06
CLCN1-201ENST00000343257 SP140LQ9H930 580 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 ENTPD7Q9NQZ7 604 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 ADAMTS5Q9UNA0 930 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 PSMD3O43242 534 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 MGEA5O60502 916 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 TULP3O75386 442 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 GGT1P19440 569 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 HTR6P50406 440 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 OR2B6P58173 313 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 LCP2Q13094 533 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 PRKG2Q13237 762 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 PRSS36Q5K4E3 855 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 TPRG1LQ5T0D9 272 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 DLEU7Q6UYE1 221 aa14.66□□□□□ -0.06
CLCN1-201ENST00000343257 PLPPR4Q7Z2D5 763 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms