RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 INO80DQ53TQ3 878 aaPredicted RBP12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 HECTD3Q5T447 861 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 DOK6Q6PKX4 331 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 CYP4V2Q6ZWL3 525 aaPredicted RBP12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 HID1Q8IV36 788 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 CENPSQ8N2Z9 138 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 CLIP4Q8N3C7 705 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 NACC2Q96BF6 587 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 NAA50Q9GZZ1 169 aaKnown RBP12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 ZDHHC6Q9H6R6 413 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 ADPRHL2Q9NX46 363 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 CD84Q9UIB8 345 aa12.27□□□□□ -0.45
SNRNP48-201ENST00000342415 EFCAB10A6NFE3 127 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 TRIM24O15164 1050 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 MAFKO60675 156 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 RAP2AP10114 183 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 HOXD10P28358 340 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 NUDT6P53370 316 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 SPANXN4Q5MJ08 99 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 SH2D5Q6ZV89 423 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 GALNT10Q86SR1 603 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 P2RY8Q86VZ1 359 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 GATAD2AQ86YP4 633 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 METTL25Q8N6Q8 603 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 OR52B6Q8NGF0 335 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 CENPIQ92674 756 aaPredicted RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 HAPLN3Q96S86 360 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 TRIM39Q9HCM9 518 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 AASSQ9UDR5 926 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 TESMINQ9Y4I5 508 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 PRDX3P30048 256 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 DPP6P42658 865 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 APLP1P51693 650 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 XKR6Q5GH73 641 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 TRMT11Q7Z4G4 463 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 STK40Q8N2I9 435 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 AMER2Q8N7J2 671 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 FAR1Q8WVX9 515 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 MTERF1Q99551 399 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 RBM4BQ9BQ04 359 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 RBM4Q9BWF3 364 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 WDR6Q9NNW5 1121 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 POLR3BQ9NW08 1133 aaPredicted RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ADAMTS5Q9UNA0 930 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 USP22Q9UPT9 525 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 K7EPI3 171 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 FZD9O00144 591 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 STK16O75716 305 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ELNP15502 786 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 IFNA8P32881 189 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 HCAR3P49019 387 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 PRKAG1P54619 331 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 VBP1P61758 197 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 PLA2G4EQ3MJ16 856 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 SNX29P2Q8IUI4 249 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 SMYD1Q8NB12 490 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ITCHQ96J02 903 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 VPS35Q96QK1 796 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 MYOCQ99972 504 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 OSBPL2Q9H1P3 480 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 MFSD1Q9H3U5 465 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 CCM2LQ9NUG4 571 aaPredicted RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ZDHHC7Q9NXF8 308 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 SLAMF8Q9P0V8 285 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 TEKT2Q9UIF3 430 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 BTBD3Q9Y2F9 522 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 CAB39Q9Y376 341 aaPredicted RBP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 VILLO15195 856 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 INSIG1O15503 277 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 DFNA5O60443 496 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 GJB3O75712 270 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 RRM2P31350 389 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 MAGEA6P43360 314 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ARSFP54793 590 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 PCBP1Q15365 356 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 OR4D1Q15615 310 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 C6orf183Q5T699 404 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ISCA2Q86U28 154 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 RAB2BQ8WUD1 216 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 ZFYVE1Q9HBF4 777 aa12.26□□□□□ -0.45
SNRNP48-201ENST00000342415 PTGESO14684 152 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 MTX2O75431 263 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 GABBR2O75899 941 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 UMPSP11172 480 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 CORO1AP31146 461 aaKnown RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 RPIAP49247 311 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TRIM32Q13049 653 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 TUBB3Q13509 450 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 ARMCX4Q5H9R4 360 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 MSANTD2Q6P1R3 559 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 OR4F6Q8NGB9 312 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 IRGQQ8WZA9 623 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 EVPLQ92817 2033 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 PTERQ96BW5 349 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 RAB23Q9ULC3 237 aa12.25□□□□□ -0.45
SNRNP48-201ENST00000342415 KCNH4Q9UQ05 1017 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms