RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SLAMF1Q13291 335 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 ZMYND11Q15326 602 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 CA9Q16790 459 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 DDR2Q16832 855 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 PPM1JQ5JR12 505 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 PITRM1Q5JRX3 1037 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 WSCD1Q658N2 575 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 LETMD1Q6P1Q0 360 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 HDAC10Q969S8 669 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 OPALINQ96PE5 141 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 REXO4Q9GZR2 422 aaKnown RBP11.71□□□□□ -0.53
RTN3-203ENST00000341307 SPAG4Q9NPE6 437 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 FAM105AQ9NUU6 356 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 POLR3BQ9NW08 1133 aaPredicted RBP11.71□□□□□ -0.53
RTN3-203ENST00000341307 PAK1IP1Q9NWT1 392 aaPredicted RBP11.71□□□□□ -0.53
RTN3-203ENST00000341307 CACNA2D2Q9NY47 1150 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 TMEM181Q9P2C4 612 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 SNX6Q9UNH7 406 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
RTN3-203ENST00000341307 HMX3A6NHT5 357 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 SEPT4O43236 478 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 HUS1O60921 280 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ADAMTS4O75173 837 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 DNAJB5O75953 348 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ALOX12P18054 663 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ACVR2AP27037 513 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 EFR3AQ14156 821 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 KCNA10Q16322 511 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ZIK1Q3SY52 487 aaPredicted RBP11.7□□□□□ -0.54
RTN3-203ENST00000341307 PAN2Q504Q3 1202 aaKnown RBP11.7□□□□□ -0.54
RTN3-203ENST00000341307 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 PNCKQ6P2M8 343 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 TXNDC11Q6PKC3 985 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ZNF767PQ75MW2 155 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 UNC93AQ86WB7 457 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 SYTL1Q8IYJ3 562 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 PARP16Q8N5Y8 322 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 PAF1Q8N7H5 531 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 KIAA1958Q8N8K9 716 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 C3orf58Q8NDZ4 430 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 HMGCLL1Q8TB92 370 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 FAR1Q8WVX9 515 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 TESCQ96BS2 214 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 YIPF6Q96EC8 236 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 SECISBP2Q96T21 854 aaKnown RBP11.7□□□□□ -0.54
RTN3-203ENST00000341307 PHOX2BQ99453 314 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 WACQ9BTA9 647 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 BDH2Q9BUT1 245 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ACSS2Q9NR19 701 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 TBC1D13Q9NVG8 400 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 DCDC2Q9UHG0 476 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 CASTOR2A6NHX0 329 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 PRPSAP2O60256 369 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 CD52P31358 61 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 CCR10P46092 362 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 KRR1Q13601 381 aaKnown RBP11.7□□□□□ -0.54
RTN3-203ENST00000341307 ZNF267Q14586 743 aaPredicted RBP11.7□□□□□ -0.54
RTN3-203ENST00000341307 SLC22A8Q8TCC7 542 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 UBXN10Q96LJ8 280 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 UROC1Q96N76 676 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 NEDD4LQ96PU5 975 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 B3GNT2Q9NY97 397 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 TAS2R7Q9NYW3 318 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTN3-203ENST00000341307 NAALAD2Q9Y3Q0 740 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 ZNF175Q9Y473 711 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 KCNE2Q9Y6J6 123 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 SZT2Q5T011 3432 aa11.7□□□□□ -0.54
RTN3-203ENST00000341307 E2F8A0AVK6 867 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 AKR7A2O43488 359 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 ZNF623O75123 536 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 SDC4P31431 198 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 CENPAP49450 140 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SCNN1GP51170 649 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 NKX3-2P78367 333 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 NFE2L1Q14494 772 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SQLEQ14534 574 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SV2CQ496J9 727 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 BCL7AQ4VC05 210 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SEL1L3Q68CR1 1132 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 REP15Q6BDI9 236 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SERINC5Q86VE9 423 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SPPL2CQ8IUH8 684 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 CRYBG2Q8N1P7 616 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 ANKRD52Q8NB46 1076 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SLC7A14Q8TBB6 771 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 DEDD2Q8WXF8 326 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SLC7A6Q92536 515 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 BEX2Q9BXY8 128 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 GHITMQ9H3K2 345 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SMOC2Q9H3U7 446 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 DTLQ9NZJ0 730 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 PNMA8BQ9ULN7 279 aaPredicted RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 GRIP1Q9Y3R0 1128 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms