RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 EDAQ92838 391 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 CNDP1Q96KN2 507 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 ITM2CQ9NQX7 267 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 ATF6P18850 670 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 POU1F1P28069 291 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 NUDT1P36639 197 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PLA2G16P53816 162 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PNLIPRP1P54315 467 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 GPRC6AQ5T6X5 926 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CMASQ8NFW8 434 aaPredicted RBP12.64□□□□□ -0.39
LIN54-201ENST00000340417 TTLQ8NG68 377 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CDKN2AIPNLQ96HQ2 116 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 NSL1Q96IY1 281 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 TMEM120AQ9BXJ8 343 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 EPN3Q9H201 632 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CLCA3PQ9Y6N3 262 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 OR51F1A6NGY5 319 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PSMA4P25789 261 aaKnown RBP12.64□□□□□ -0.39
LIN54-201ENST00000340417 PARM1Q6UWI2 310 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 BEND5Q7L4P6 421 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 NPAS3Q8IXF0 933 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 NELL1Q92832 810 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 SPATA5L1Q9BVQ7 753 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 K7ERQ8 282 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 LDB2O43679 373 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 WFS1O76024 890 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PSMA3P25788 255 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 LSP1P33241 339 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 ITIH4Q14624 930 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CPT1BQ92523 772 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 A8MUA0 341 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 FAM220BPB1ANY3 271 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 LIN7AO14910 233 aaPredicted RBP12.64□□□□□ -0.39
LIN54-201ENST00000340417 KCNH1O95259 989 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 GNAZP19086 355 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 HOXA9P31269 272 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CDH13P55290 713 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 ACAP2Q15057 778 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 NR0B2Q15466 257 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 RNF44Q7L0R7 432 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PIWIL4Q7Z3Z4 852 aaKnown RBP12.64□□□□□ -0.39
LIN54-201ENST00000340417 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 EXD2Q9NVH0 621 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 TMEM216Q9P0N5 145 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 C2orf74A8MZ97 194 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 AZIN1O14977 448 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CDH5P33151 784 aaPredicted RBP12.64□□□□□ -0.39
LIN54-201ENST00000340417 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 ANXA8L1Q5VT79 327 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 KIAA0930Q6ICG6 404 aaPredicted RBP12.64□□□□□ -0.39
LIN54-201ENST00000340417 RIPOR1Q6ZS17 1223 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 PHF21AQ96BD5 680 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 CEP19Q96LK0 163 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 IMPAD1Q9NX62 359 aa12.64□□□□□ -0.39
LIN54-201ENST00000340417 MYH6P13533 1939 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 A8MUI8 341 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 ALOX15BO15296 676 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CCND1P24385 295 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 LUZP2Q86TE4 346 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TMEM173Q86WV6 379 aaPredicted RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 SLC43A3Q8NBI5 491 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 ZDHHC1Q8WTX9 485 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 IPPKQ9H8X2 491 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 KCNK12Q9HB15 430 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TCRBV7S2A1N4TA0A589 114 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 LINC00032P0C843 101 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 PITX1P78337 314 aaPredicted RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 SMPDL3AQ92484 453 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CAVIN3Q969G5 261 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 VPS33AQ96AX1 596 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 EXOSC8Q96B26 276 aaKnown RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 PRRG3Q9BZD7 231 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.63□□□□□ -0.398e-7■■□□□ 13.7
LIN54-201ENST00000340417 WARS2Q9UGM6 360 aaKnown RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 BCAT2O15382 392 aaPredicted RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 LINC01565O15544 149 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TPST1O60507 370 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 RPS15P62841 145 aaKnown RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 PDK4Q16654 411 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 EML3Q32P44 896 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 FGD3Q5JSP0 725 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TMEM156Q8N614 296 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 OR4A15Q8NGL6 344 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 TMEM245Q9H330 911 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 ACSS3Q9H6R3 686 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CWH43Q9H720 699 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 MAT2BQ9NZL9 334 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CCDC167Q9P0B6 97 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 DGKBQ9Y6T7 804 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 CCT8P50990 548 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 C2orf80Q0P641 193 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 FLOT2Q14254 428 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 LIPMQ5VYY2 423 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms