RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
RET-201ENST00000340058 RBM47A0AV96 593 aaKnown RBP14.5□□□□□ -0.09
RET-201ENST00000340058 ZNF840PA6NDX5 716 aa14.5□□□□□ -0.09
RET-201ENST00000340058 TEX28O15482 410 aa14.5□□□□□ -0.09
RET-201ENST00000340058 NPHS1O60500 1241 aa14.5□□□□□ -0.09
RET-201ENST00000340058 NUP107P57740 925 aa14.5□□□□□ -0.09
RET-201ENST00000340058 TRIM25Q14258 630 aaKnown RBP14.5□□□□□ -0.09
RET-201ENST00000340058 SF1Q15637 639 aaKnown RBP14.5□□□□□ -0.09
RET-201ENST00000340058 KCTD21Q4G0X4 260 aa14.5□□□□□ -0.09
RET-201ENST00000340058 RABL3Q5HYI8 236 aa14.5□□□□□ -0.09
RET-201ENST00000340058 TPGS2Q68CL5 300 aa14.5□□□□□ -0.09
RET-201ENST00000340058 LRRC66Q68CR7 880 aa14.5□□□□□ -0.09
RET-201ENST00000340058 AAGABQ6PD74 315 aa14.5□□□□□ -0.09
RET-201ENST00000340058 TMCO5AQ8N6Q1 288 aa14.5□□□□□ -0.09
RET-201ENST00000340058 FBXO27Q8NI29 283 aa14.5□□□□□ -0.09
RET-201ENST00000340058 CANT1Q8WVQ1 401 aa14.5□□□□□ -0.09
RET-201ENST00000340058 ACDQ96AP0 544 aa14.5□□□□□ -0.09
RET-201ENST00000340058 FADS3Q9Y5Q0 445 aa14.5□□□□□ -0.09
RET-201ENST00000340058 CCDC85CA6NKD9 419 aa14.5□□□□□ -0.09
RET-201ENST00000340058 IFNA14P01570 189 aa14.5□□□□□ -0.09
RET-201ENST00000340058 UQCRBP14927 111 aa14.5□□□□□ -0.09
RET-201ENST00000340058 RPL10P27635 214 aaKnown RBP14.5□□□□□ -0.09
RET-201ENST00000340058 NSG1P42857 185 aa14.5□□□□□ -0.09
RET-201ENST00000340058 SSR2P43308 183 aa14.5□□□□□ -0.09
RET-201ENST00000340058 ATP1A4Q13733 1029 aa14.5□□□□□ -0.09
RET-201ENST00000340058 ZNF648Q5T619 568 aaPredicted RBP14.5□□□□□ -0.09
RET-201ENST00000340058 GPR107Q5VW38 600 aa14.5□□□□□ -0.09
RET-201ENST00000340058 UTS2BQ765I0 119 aa14.5□□□□□ -0.09
RET-201ENST00000340058 ZNF557Q8N988 423 aaPredicted RBP14.5□□□□□ -0.09
RET-201ENST00000340058 KLHL23Q8NBE8 558 aa14.5□□□□□ -0.09
RET-201ENST00000340058 WDR48Q8TAF3 677 aa14.5□□□□□ -0.09
RET-201ENST00000340058 RORBQ92753 470 aa14.5□□□□□ -0.09
RET-201ENST00000340058 PROX1Q92786 737 aa14.5□□□□□ -0.09
RET-201ENST00000340058 NLNQ9BYT8 704 aa14.5□□□□□ -0.09
RET-201ENST00000340058 MAP4K5Q9Y4K4 846 aa14.5□□□□□ -0.09
RET-201ENST00000340058 SPACA6W5XKT8 324 aa14.5□□□□□ -0.09
RET-201ENST00000340058 STRCQ7RTU9 1775 aa14.5□□□□□ -0.09
RET-201ENST00000340058 STC2O76061 302 aa14.49□□□□□ -0.09
RET-201ENST00000340058 TYRP14679 529 aa14.49□□□□□ -0.09
RET-201ENST00000340058 HPGDP15428 266 aa14.49□□□□□ -0.09
RET-201ENST00000340058 CDKN1CP49918 316 aaPredicted RBP14.49□□□□□ -0.09
RET-201ENST00000340058 CCR4P51679 360 aa14.49□□□□□ -0.09
RET-201ENST00000340058 STC1P52823 247 aa14.49□□□□□ -0.09
RET-201ENST00000340058 PLA2G16P53816 162 aa14.49□□□□□ -0.09
RET-201ENST00000340058 CREMQ03060 361 aa14.49□□□□□ -0.09
RET-201ENST00000340058 BEND7Q8N7W2 519 aaPredicted RBP14.49□□□□□ -0.09
RET-201ENST00000340058 OR2T34Q8NGX1 318 aa14.49□□□□□ -0.09
RET-201ENST00000340058 OR2T3Q8NH03 318 aa14.49□□□□□ -0.09
RET-201ENST00000340058 XAGE5Q8WWM1 108 aa14.49□□□□□ -0.09
RET-201ENST00000340058 IMP4Q96G21 291 aaKnown RBP14.49□□□□□ -0.09
RET-201ENST00000340058 ANKRD27Q96NW4 1050 aa14.49□□□□□ -0.09
RET-201ENST00000340058 CTPS2Q9NRF8 586 aa14.49□□□□□ -0.09
RET-201ENST00000340058 TDP1Q9NUW8 608 aa14.49□□□□□ -0.09
RET-201ENST00000340058 MARF1Q9Y4F3 1742 aaKnown RBP14.49□□□□□ -0.09
RET-201ENST00000340058 LRP5O75197 1615 aa14.49□□□□□ -0.09
RET-201ENST00000340058 A0A087WXM4 84 aa14.49□□□□□ -0.09
RET-201ENST00000340058 FAM189A1O60320 539 aa14.49□□□□□ -0.09
RET-201ENST00000340058 LYNP07948 512 aa14.49□□□□□ -0.09
RET-201ENST00000340058 MYCLP1P12525 358 aaPredicted RBP14.49□□□□□ -0.09
RET-201ENST00000340058 SLC18A1P54219 525 aa14.49□□□□□ -0.09
RET-201ENST00000340058 C2orf80Q0P641 193 aa14.49□□□□□ -0.09
RET-201ENST00000340058 CPTPQ5TA50 214 aa14.49□□□□□ -0.09
RET-201ENST00000340058 CAPN13Q6MZZ7 669 aaPredicted RBP14.49□□□□□ -0.09
RET-201ENST00000340058 C8orf59Q8N0T1 100 aaPredicted RBP14.49□□□□□ -0.09
RET-201ENST00000340058 BTN2A2Q8WVV5 523 aa14.49□□□□□ -0.09
RET-201ENST00000340058 REPS1Q96D71 796 aa14.49□□□□□ -0.09
RET-201ENST00000340058 KLHL3Q9UH77 587 aa14.49□□□□□ -0.09
RET-201ENST00000340058 ZNF510Q9Y2H8 683 aa14.49□□□□□ -0.09
RET-201ENST00000340058 FAM163BP0C2L3 166 aa14.49□□□□□ -0.09
RET-201ENST00000340058 NR2F1P10589 423 aa14.49□□□□□ -0.09
RET-201ENST00000340058 PREPP48147 710 aa14.49□□□□□ -0.09
RET-201ENST00000340058 TNK2Q07912 1038 aa14.49□□□□□ -0.09
RET-201ENST00000340058 PTPRRQ15256 657 aa14.49□□□□□ -0.09
RET-201ENST00000340058 PSAPL1Q6NUJ1 521 aa14.49□□□□□ -0.09
RET-201ENST00000340058 METTL3Q86U44 580 aaKnown RBP14.49□□□□□ -0.09
RET-201ENST00000340058 C17orf64Q86WR6 236 aa14.49□□□□□ -0.09
RET-201ENST00000340058 COLGALT2Q8IYK4 626 aa14.49□□□□□ -0.09
RET-201ENST00000340058 KRT78Q8N1N4 520 aa14.49□□□□□ -0.09
RET-201ENST00000340058 VANGL1Q8TAA9 524 aaPredicted RBP14.49□□□□□ -0.09
RET-201ENST00000340058 EXOSC8Q96B26 276 aaKnown RBP14.49□□□□□ -0.09
RET-201ENST00000340058 PPCDCQ96CD2 204 aa14.49□□□□□ -0.09
RET-201ENST00000340058 COQ10BQ9H8M1 238 aa14.49□□□□□ -0.09
RET-201ENST00000340058 NDUFA13Q9P0J0 144 aa14.49□□□□□ -0.09
RET-201ENST00000340058 B4GALT6Q9UBX8 382 aa14.49□□□□□ -0.09
RET-201ENST00000340058 ENTPD4Q9Y227 616 aa14.49□□□□□ -0.09
RET-201ENST00000340058 hCG_2039718K7EN88 272 aa14.48□□□□□ -0.09
RET-201ENST00000340058 MATN2O00339 956 aa14.48□□□□□ -0.09
RET-201ENST00000340058 HNRNPRO43390 633 aaKnown RBP14.48□□□□□ -0.09
RET-201ENST00000340058 RPN2P04844 631 aa14.48□□□□□ -0.09
RET-201ENST00000340058 UFM1P61960 85 aa14.48□□□□□ -0.09
RET-201ENST00000340058 LYPLAL1Q5VWZ2 237 aa14.48□□□□□ -0.09
RET-201ENST00000340058 MBOAT1Q6ZNC8 495 aa14.48□□□□□ -0.09
RET-201ENST00000340058 MAGEC3Q8TD91 643 aa14.48□□□□□ -0.09
RET-201ENST00000340058 POF1BQ8WVV4 589 aa14.48□□□□□ -0.09
RET-201ENST00000340058 MCM8Q9UJA3 840 aa14.48□□□□□ -0.09
RET-201ENST00000340058 ANKRD36CQ5JPF3 1778 aa14.48□□□□□ -0.09
RET-201ENST00000340058 FAM220BPB1ANY3 271 aa14.48□□□□□ -0.09
RET-201ENST00000340058 ADSLP30566 484 aaPredicted RBP14.48□□□□□ -0.09
RET-201ENST00000340058 MANFP55145 182 aaKnown RBP14.48□□□□□ -0.09
RET-201ENST00000340058 CDKN2DP55273 166 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms