RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 KAT2AQ92830 837 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SERAC1Q96JX3 654 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 C5orf34Q96MH7 638 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 OSMRQ99650 979 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 P2RY13Q9BPV8 354 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM109Q9BVC6 243 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 KCNIP2Q9NS61 270 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LEF1Q9UJU2 399 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PADI4Q9UM07 663 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SPATA2Q9UM82 520 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PCDHGA2Q9Y5H1 932 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ASCC3Q8N3C0 2202 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PATJQ8NI35 1801 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 BTBD17A6NE02 478 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 INPPL1O15357 1258 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CCNKO75909 580 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HOXB2P14652 356 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ATP4AP20648 1035 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GRK5P34947 590 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NRG3P56975 720 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PRKCEQ02156 737 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 DACT2Q5SW24 774 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM154Q6P9G4 183 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FAM174AQ8TBP5 190 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZBED3Q96IU2 234 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 AGAP3Q96P47 875 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NELFAQ9H3P2 528 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CD93Q9NPY3 652 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 C15orf41Q9Y2V0 281 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CACNA1BQ00975 2339 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RBAK-RBAKDNI3L0D1 243 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HSPA12AO43301 675 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SOX15O60248 233 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CLPXO76031 633 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MATKP42679 507 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SEC13P55735 322 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ADAM17P78536 824 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SEMG2Q02383 582 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 BRMS1LQ5PSV4 323 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 DPY19L2P1Q6NXN4 242 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SYT13Q7L8C5 426 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 OAFQ86UD1 273 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GALNT13Q8IUC8 556 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 OFCC1Q8IZS5 231 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ASCC1Q8N9N2 400 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LRRC57Q8N9N7 239 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 KREMEN2Q8NCW0 462 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CYP2W1Q8TAV3 490 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SLC22A18Q96BI1 424 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LXNQ9BS40 222 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RIOK2Q9BVS4 552 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CST11Q9H112 138 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ASB4Q9Y574 426 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ILVBLA1L0T0 632 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RGS10O43665 173 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RDH16O75452 317 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 STAU1O95793 577 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 IFNA1P01562 189 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HTR2AP28223 471 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CASP2P42575 452 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MLLT6P55198 1093 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MPP1Q00013 466 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PTRHD1Q6GMV3 140 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SLC15A3Q8IY34 581 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 REPS2Q8NFH8 660 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 B4GALNT2Q8NHY0 566 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MAPK15Q8TD08 544 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 AARSD1Q9BTE6 412 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CCDC32Q9BV29 185 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 WDR55Q9H6Y2 383 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 UBE2ZQ9H832 354 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PDE7BQ9NP56 450 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PAK1IP1Q9NWT1 392 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NOP16Q9Y3C1 178 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 BRWD1Q9NSI6 2320 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF541Q9H0D2 1346 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF487B1APH4 448 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 B8ZZF3 427 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 H3BQ06 376 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 M0R036 132 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 EML1O00423 815 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ADAMTS3O15072 1205 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 JAK2O60674 1132 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NUDT14O95848 222 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ENO1P06733 434 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 EPHX1P07099 455 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FOSL1P15407 271 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ABOP16442 354 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SUOXP51687 545 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RAB4BP61018 213 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CLVS2Q5SYC1 327 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CERCAMQ5T4B2 595 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RGS9BPQ6ZS82 235 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF767PQ75MW2 155 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TICAM1Q8IUC6 712 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FAM126BQ8IXS8 530 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TBCKQ8TEA7 893 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SNAPC3Q92966 411 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CD248Q9HCU0 757 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms