RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TMEM237Q96Q45 408 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 C2orf42Q9NWW7 574 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 UTP6Q9NYH9 597 aaKnown RBP14.45□□□□□ -0.1
CBX3-201ENST00000337620 MARCOQ9UEW3 520 aaPredicted RBP14.45□□□□□ -0.1
CBX3-201ENST00000337620 TMEM114B3SHH9 223 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 CHURC1-FNTBB4DL54 471 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 KPNA5O15131 536 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 SLC31A1O15431 190 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 CBSLP0DN79 551 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 MTHFD2P13995 350 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 PBLDP30039 288 aaPredicted RBP14.45□□□□□ -0.1
CBX3-201ENST00000337620 CBSP35520 551 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 CCR10P46092 362 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 PRLHRP49683 370 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 PPP2CBP62714 309 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 PPP2CAP67775 309 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 FZD5Q13467 585 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 GAS6Q14393 721 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 ZSCAN26Q16670 478 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 ANO7Q6IWH7 933 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 FRA10AC1Q70Z53 315 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 TRAPPC5Q8IUR0 188 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 PTGR2Q8N8N7 351 aaPredicted RBP14.45□□□□□ -0.1
CBX3-201ENST00000337620 TP53I13Q8NBR0 393 aaPredicted RBP14.45□□□□□ -0.1
CBX3-201ENST00000337620 CCM2Q9BSQ5 444 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 LGR4Q9BXB1 951 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 C1QTNF7Q9BXJ2 289 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 BTBD1Q9H0C5 482 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 EBF1Q9UH73 591 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 DCTN4Q9UJW0 460 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 OR1A2Q9Y585 309 aa14.45□□□□□ -0.1
CBX3-201ENST00000337620 TMEM202A6NGA9 273 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 C7P10643 843 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ZNF8P17098 575 aaPredicted RBP14.44□□□□□ -0.1
CBX3-201ENST00000337620 CDK3Q00526 305 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 MAP7D1Q3KQU3 841 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 PLEKHS1Q5SXH7 462 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 NEK5Q6P3R8 708 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 CYHR1Q6ZMK1 362 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 RAB44Q7Z6P3 723 aaPredicted RBP14.44□□□□□ -0.1
CBX3-201ENST00000337620 ADAMTSL2Q86TH1 951 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 FBXO39Q8N4B4 442 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ANKS4BQ8N8V4 417 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 RFWD2Q8NHY2 731 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ASZ1Q8WWH4 475 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 COX14Q96I36 57 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 SORT1Q99523 831 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 MYOCQ99972 504 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 FAM126AQ9BYI3 521 aaPredicted RBP14.44□□□□□ -0.1
CBX3-201ENST00000337620 DRC3Q9H069 523 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 KDM4CQ9H3R0 1056 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 FZD3Q9NPG1 666 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ITM2CQ9NQX7 267 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 CD274Q9NZQ7 290 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 DNAJC16Q9Y2G8 782 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 C19orf67A6NJJ6 358 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 RAD51BO15315 384 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 VEGFDO43915 354 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 TGDSO95455 350 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 CHRNGP07510 517 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ENO3P13929 434 aaPredicted RBP14.44□□□□□ -0.1
CBX3-201ENST00000337620 IMPDH1P20839 514 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 HK3P52790 923 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 RCN2Q14257 317 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ARL13AQ5H913 290 aaPredicted RBP14.44□□□□□ -0.1
CBX3-201ENST00000337620 RPS27LQ71UM5 84 aaKnown RBP14.44□□□□□ -0.1
CBX3-201ENST00000337620 VRK3Q8IV63 474 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 TSTD1Q8NFU3 115 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 HHIPQ96QV1 700 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 NELL2Q99435 816 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 SHCBP1LQ9BZQ2 653 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 EPHX3Q9H6B9 360 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 WDR26Q9H7D7 661 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 KLHL14Q9P2G3 628 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 ADAMTS6Q9UKP5 1117 aa14.44□□□□□ -0.1
CBX3-201ENST00000337620 A0A0G2JND7 137 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 CCDC189A1A4V9 331 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 LRRC72A6NJI9 287 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 EBAG9O00559 213 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 SNX2O60749 519 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 SUPT7LO94864 414 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 SIX3O95343 332 aaPredicted RBP14.43□□□□□ -0.1
CBX3-201ENST00000337620 NFKB2Q00653 900 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 TGFBIQ15582 683 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 FBXO48Q5FWF7 155 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 ZNF678Q5SXM1 525 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 CRTC3Q6UUV7 619 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 SBSNQ6UWP8 590 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 AGR3Q8TD06 166 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 TEX101Q9BY14 249 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 PNPOQ9NVS9 261 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 ARL2BPQ9Y2Y0 163 aa14.43□□□□□ -0.1
CBX3-201ENST00000337620 NPHS1O60500 1241 aa14.42□□□□□ -0.1
CBX3-201ENST00000337620 TRIM23P36406 574 aa14.42□□□□□ -0.1
CBX3-201ENST00000337620 HERVK_113P63132 956 aa14.42□□□□□ -0.1
CBX3-201ENST00000337620 BCL7AQ4VC05 210 aa14.42□□□□□ -0.1
CBX3-201ENST00000337620 UBALD2Q8IYN6 164 aa14.42□□□□□ -0.1
CBX3-201ENST00000337620 LILRA3Q8N6C8 439 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms