RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 IRGQQ8WZA9 623 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 AKT1S1Q96B36 256 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 AIF1LQ9BQI0 150 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 POLR2J2Q9GZM3 115 aaKnown RBP6.73□□□□□ -1.33
PBRM1-202ENST00000337303 DCSTAMPQ9H295 470 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 SNTG1Q9NSN8 517 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 MAT2BQ9NZL9 334 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 TESMINQ9Y4I5 508 aa6.73□□□□□ -1.33
PBRM1-202ENST00000337303 IFT172Q9UG01 1749 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GLYATL1P3A0A0U1RQE8 302 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 RIIAD1A6NNX1 92 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 MAGEB17A8MXT2 336 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 H3BNH8 94 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 hCG_2039718K7EN88 272 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TP73O15350 636 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ESR1P03372 595 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SAGP10523 405 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PEPDP12955 493 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ITGA3P26006 1051 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PTGS2P35354 604 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SLC15A1P46059 708 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 RPIAP49247 311 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GDF10P55107 478 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TUBA1BP68363 451 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GTF2H2Q13888 395 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NPTX1Q15818 432 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 FAM174BQ3ZCQ3 159 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 FBXO43Q4G163 708 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 KLHL22Q53GT1 634 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 RNASE12Q5GAN4 147 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ADNP2Q6IQ32 1131 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GTF2H2CQ6P1K8 395 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TUBA1AQ71U36 451 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 HID1Q8IV36 788 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NIPA2Q8N8Q9 360 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 DCAKDQ8WVC6 231 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TRIM2Q9C040 744 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NECTIN3Q9NQS3 549 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 OXSMQ9NWU1 459 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 IKZF2Q9UKS7 526 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NCKAP1Q9Y2A7 1128 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 RPL36Q9Y3U8 105 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ARHGAP23Q9P227 1491 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TRAV19A0A0A6YYK7 116 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ABHD14A-ACY1A0A1B0GW23 586 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 OR6C75A6NL08 312 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 C1QTNF3-AMACRE9PGA6 284 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GTPBP1O00178 669 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ACOX3O15254 700 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 HCN1O60741 890 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NME6O75414 186 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 IFNA7P01567 189 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 CYP11A1P05108 521 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PBX3P40426 434 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 CRYBB1P53674 252 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 DCDC1P59894 354 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 RPS14P62263 151 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PCDH1Q08174 1060 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 LARS2Q15031 903 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 COLEC12Q5KU26 742 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TMEM198Q66K66 360 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GPR153Q6NV75 609 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TMPRSS11BQ86T26 416 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SLITRK4Q8IW52 837 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SRFBP1Q8NEF9 429 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SPATA22Q8NHS9 363 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SOCS4Q8WXH5 440 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 UFD1Q92890 307 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 CXorf40BQ96DE9 158 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ART5Q96L15 291 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 SLC4A9Q96Q91 983 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TTLL2Q9BWV7 592 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GBA2Q9HCG7 927 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 DTLQ9NZJ0 730 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 MED11Q9P086 117 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 UPB1Q9UBR1 384 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 MRPS33Q9Y291 106 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NID2Q14112 1375 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 M0QX08 132 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 GRIN3BO60391 1043 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 ERN1O75460 977 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 CLPXO76031 633 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PRAMEF1O95521 474 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 CLK3P49761 638 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 CDH15P55291 814 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 AP1S2P56377 157 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 MTPNP58546 118 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TUBA3CQ13748 450 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 IQCCQ4KMZ1 466 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 NIPAL1Q6NVV3 410 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 DNAJB7Q7Z6W7 309 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 LDB1Q86U70 411 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-202ENST00000337303 TMEM126BQ8IUX1 230 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 LIX1Q8N485 282 aa6.72□□□□□ -1.33
PBRM1-202ENST00000337303 PIGXQ8TBF5 258 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms