RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ATG10Q9H0Y0 220 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 EFCAB1Q9HAE3 211 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 SPATA7Q9P0W8 599 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 TMPRSS11EQ9UL52 423 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 KIAA1671Q9BY89 1806 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 SLCO1B7G3V0H7 640 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 MT-ND1P03886 318 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 SPAM1P38567 509 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 RECQLP46063 649 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 MTTPP55157 894 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CDKN3Q16667 212 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 SBSNQ6UWP8 590 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 LCA5Q86VQ0 697 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 NKAPQ8N5F7 415 aaKnown RBP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CEP295NLQ96MC4 621 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CCDC28BQ9BUN5 200 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 C1orf21Q9H246 121 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 WWOXQ9NZC7 414 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 KNL1Q8NG31 2342 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 GIPC1O14908 333 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 FFAR2O15552 330 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 HTRA2O43464 458 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ESR1P03372 595 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ZCCHC18P0CG32 403 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ACRV1P26436 265 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 NRIP1P48552 1158 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 NEK2P51955 445 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 STX1BP61266 288 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SNX20Q7Z614 316 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 GALNT4Q8N4A0 578 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 FNDC5Q8NAU1 212 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 OR4F6Q8NGB9 312 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SMG7Q92540 1137 aaKnown RBP12.39□□□□□ -0.43
LIMK1-201ENST00000336180 KCNJ9Q92806 393 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 CACNA2D2Q9NY47 1150 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SARDHQ9UL12 918 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 PRKAB1Q9Y478 270 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 E2F3O00716 465 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 MAP3K7O43318 606 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 POLR2EP19388 210 aaKnown RBP12.39□□□□□ -0.43
LIMK1-201ENST00000336180 CCR7P32248 378 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 PPIGQ13427 754 aaKnown RBP eCLIP12.39□□□□□ -0.437e-6■□□□□ 9.9
LIMK1-201ENST00000336180 TIGD2Q4W5G0 525 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SFT2D3Q587I9 215 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 GOLGA7Q7Z5G4 137 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 TMEM74Q96NL1 305 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 TCF12Q99081 682 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 NRTNQ99748 197 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 TRIM4Q9C037 500 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 IPPKQ9H8X2 491 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 DHRS7Q9Y394 339 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ANGPTL3Q9Y5C1 460 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 GON4LQ3T8J9 2241 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ARHGAP10A1A4S6 786 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SCAMP1O15126 338 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SNRPB2P08579 225 aaKnown RBP12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ITPKAP23677 461 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 DGKQP52824 942 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 SF1Q15637 639 aaKnown RBP12.39□□□□□ -0.43
LIMK1-201ENST00000336180 CPSF6Q16630 551 aaKnown RBP eCLIP12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF423Q2M1K9 1284 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 ARHGAP15Q53QZ3 475 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 GPRIN3Q6ZVF9 776 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 RBFAQ8N0V3 343 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 MYO1HQ8N1T3 1032 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 NXPE1Q8N323 547 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 FAM81AQ8TBF8 368 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 DHRS1Q96LJ7 313 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 KLQ9UEF7 1012 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 RNF11Q9Y3C5 154 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 PCDHGA7Q9Y5G6 932 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 F5P12259 2224 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 OBSL1O75147 1896 aa12.39□□□□□ -0.43
LIMK1-201ENST00000336180 PFDN6O15212 129 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 TAPBPO15533 448 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 B3GALT4O96024 378 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
LIMK1-201ENST00000336180 PREPP48147 710 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 ATP6V0D1P61421 351 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 GRM2Q14416 872 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 AARS2Q5JTZ9 985 aaKnown RBP12.38□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF783Q6ZMS7 281 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 USP45Q70EL2 814 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 GALNT7Q86SF2 657 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 ZBTB2Q8N680 514 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 PEX13Q92968 403 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
LIMK1-201ENST00000336180 YIPF3Q9GZM5 350 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 PCDH12Q9NPG4 1184 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 PRR23AA6NEV1 266 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 NCK1P16333 377 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 GPX3P22352 226 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 AQP4P55087 323 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms