RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TTPALQ9BTX7 342 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 IL37Q9NZH6 218 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 IFT52Q9Y366 437 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 BOLA1Q9Y3E2 137 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 SLC30A1Q9Y6M5 507 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 ACSL4O60488 711 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 ALDOCP09972 364 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 SELPP16109 830 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 ZNF37AP17032 561 aaPredicted RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 IMPDH1P20839 514 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 CORO1AP31146 461 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 RACK1P63244 317 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 TSNQ15631 228 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 PAGE2BQ5JRK9 111 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 MRNIPQ6NTE8 343 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 AUTS2Q8WXX7 1259 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 HBEGFQ99075 208 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 LHPPQ9H008 270 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 EML4Q9HC35 981 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 SCUBE2Q9NQ36 999 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 OAZ3Q9UMX2 235 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 PCDHGA7Q9Y5G6 932 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 DNAJC15Q9Y5T4 150 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 A8MX80 341 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 TAF4O00268 1085 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 SYNCRIPO60506 623 aaKnown RBP13.71□□□□□ -0.21
SF1-202ENST00000334944 SEC24AO95486 1093 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 PRDX3P30048 256 aaKnown RBP13.71□□□□□ -0.21
SF1-202ENST00000334944 SEMG2Q02383 582 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 BRSK1Q8TDC3 778 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 ASB9Q96DX5 294 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 OLA1Q9NTK5 396 aaKnown RBP13.71□□□□□ -0.21
SF1-202ENST00000334944 ANKMY1Q9P2S6 941 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 UBA2Q9UBT2 640 aaPredicted RBP13.71□□□□□ -0.21
SF1-202ENST00000334944 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 UNC80Q8N2C7 3258 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 MYO7AQ13402 2215 aa13.71□□□□□ -0.21
SF1-202ENST00000334944 NR5A2O00482 541 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 EI24O14681 340 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 PIP5K1BO14986 540 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 NIPSNAP2O75323 286 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.22
SF1-202ENST00000334944 SRP72O76094 671 aaKnown RBP13.71□□□□□ -0.22
SF1-202ENST00000334944 CDK14O94921 469 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 PAPSS2O95340 614 aaPredicted RBP13.71□□□□□ -0.22
SF1-202ENST00000334944 MTHFD2P13995 350 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 FDXRP22570 491 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 POLD2P49005 469 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 SEPHS1P49903 392 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 PLD1Q13393 1074 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 REP15Q6BDI9 236 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 PSAPL1Q6NUJ1 521 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 SLC38A6Q8IZM9 456 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 EFHD2Q96C19 240 aaPredicted RBP13.71□□□□□ -0.22
SF1-202ENST00000334944 C19orf60Q96EN9 201 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 GPR21Q99679 349 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 ATP13A3Q9H7F0 1226 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 LTB4R2Q9NPC1 389 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 IFT80Q9P2H3 777 aaPredicted RBP13.71□□□□□ -0.22
SF1-202ENST00000334944 DNMT3LQ9UJW3 386 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 THSD7BQ9C0I4 1608 aa13.71□□□□□ -0.22
SF1-202ENST00000334944 NPEPPSL1A6NEC2 478 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 CCRL2O00421 344 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 PRAMEF12O95522 483 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 FGF1P05230 155 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 CES1P23141 567 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 TWF1Q12792 350 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 PTPRNQ16849 979 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 TBCELQ5QJ74 424 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 KIAA1841Q6NSI8 718 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 FAM45BPQ6NSW5 357 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 MAGEE2Q8TD90 523 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 TADA1Q96BN2 335 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 MEAF6Q9HAF1 191 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 AGRPO00253 132 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 SNAP29O95721 258 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 NDST3O95803 873 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 RHOCP08134 193 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 CTPS1P17812 591 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 STC1P52823 247 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 HERVK_113P63132 956 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 OCA2Q04671 838 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 CAPRIN1Q14444 709 aaKnown RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 FAM214AQ32MH5 1076 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 PLA2G4EQ3MJ16 856 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 VPS26BQ4G0F5 336 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms