RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TRBV5-4A0A0C4DH59 114 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 MYOCOSA0A1B0GUC4 107 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 CCDC154A6NI56 674 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 LEFTY2O00292 366 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 TAPBPO15533 448 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 AKAP10O43572 662 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 PGM3O95394 542 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 ACRP10323 421 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 SERPINA4P29622 427 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 MAPK8P45983 427 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 LIN52Q52LA3 116 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 CMTR2Q8IYT2 770 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 CPXM2Q8N436 756 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 GPR26Q8NDV2 337 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 OR2AP1Q8NGE2 309 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 PROKR1Q8TCW9 393 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 TMEM125Q96AQ2 219 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 TMEM74Q96NL1 305 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 EGFL8Q99944 293 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 FAM192AQ9GZU8 254 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 CCL26Q9Y258 94 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 TNPO3Q9Y5L0 923 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 LTBP2Q14767 1821 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 FGF18O76093 207 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 SMIM18P0DKX4 95 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 SRCP12931 536 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CKMT2P17540 419 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 HLA-FP30511 346 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 SPAM1P38567 509 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PIK3CGP48736 1102 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 RGS4P49798 205 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CREB5Q02930 508 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 TRAF3Q13114 568 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 ABRAXAS2Q15018 415 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 AAK1Q2M2I8 961 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PLA2G4EQ3MJ16 856 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PDCD4Q53EL6 469 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CRTC1Q6UUV9 634 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 KIAA2013Q8IYS2 634 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 TMEM199Q8N511 208 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 ZBTB2Q8N680 514 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 UHRF1Q96T88 793 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CORO1BQ9BR76 489 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 EFHD1Q9BUP0 239 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC46A2Q9BY10 475 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 FAM126AQ9BYI3 521 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PFDN4Q9NQP4 134 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 INTS7Q9NVH2 962 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 MYO7AQ13402 2215 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 TRAV19A0A0A6YYK7 116 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 ARPC2O15144 300 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 AP1G1O43747 822 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 TPST1O60507 370 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 EEDO75530 441 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 C8AP07357 584 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 MTHFD1P11586 935 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 DGKAP23743 735 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 HSPA13P48723 471 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CSNK1DP48730 415 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 MRPL19P49406 292 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 MYBPC1Q00872 1141 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 FOXM1Q08050 763 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 GRIK2Q13002 908 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 NR6A1Q15406 480 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 MPP7Q5T2T1 576 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 GPRC6AQ5T6X5 926 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 LRRC66Q68CR7 880 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 MBOAT1Q6ZNC8 495 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 RFLNAQ6ZTI6 216 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 NXPE1Q8N323 547 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PIP4K2CQ8TBX8 421 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 TSPEARQ8WU66 669 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 TRIM54Q9BYV2 358 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 ZBP1Q9H171 429 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 SUN2Q9UH99 717 aa14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 PTBP2Q9UKA9 531 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 CNOT11Q9UKZ1 510 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-201ENST00000331433 ZNF106Q9H2Y7 1883 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 CLTBP09497 229 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 G6PDP11413 515 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 OXTRP30559 389 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 GSK3BP49841 420 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 TBCELQ5QJ74 424 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 IYDQ6PHW0 289 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC2A7Q6PXP3 512 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 MILR1Q7Z6M3 343 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC22A17Q8WUG5 538 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 ZUFSPQ96AP4 578 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 CENPKQ9BS16 269 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 TMEM79Q9BSE2 394 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 ALG2Q9H553 416 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 LATS2Q9NRM7 1088 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 CCM2LQ9NUG4 571 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 ZIM2Q9NZV7 527 aa14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 LEF1Q9UJU2 399 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-201ENST00000331433 USP22Q9UPT9 525 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms