RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 LILRA3Q8N6C8 439 aaPredicted RBP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 RNF148Q8N7C7 305 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF781Q8N8C0 355 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 FAM45AQ8TCE6 357 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 SLC30A3Q99726 388 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 IMP3Q9NV31 184 aaKnown RBP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 IL17CQ9P0M4 197 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 FBXO10Q9UK96 956 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 CACNA1IQ9P0X4 2223 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TYROBPO43914 113 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 HOXA9P31269 272 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 MAP7Q14244 749 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TCHHL1Q5QJ38 904 aaPredicted RBP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TEX26Q8N6G2 289 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TUBGCP3Q96CW5 907 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 HHIPQ96QV1 700 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TRIM54Q9BYV2 358 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 CYP8B1Q9UNU6 501 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 PRSS21Q9Y6M0 314 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 K7ESM1 405 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 DCXO43602 365 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 EGFP01133 1207 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 CES1P23141 567 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 EEF1DP29692 281 aaKnown RBP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 HMGCLP35914 325 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 MAGEA3P43357 314 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 CDC16Q13042 620 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 KIAA1211LQ6NV74 962 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 Q6ZS52 159 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 FAM160A2Q8N612 972 aaPredicted RBP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 NSUN5Q96P11 429 aaKnown RBP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 KCNK6Q9Y257 313 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 MTCH2Q9Y6C9 303 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TCRBV21S2A2A0A5A6 115 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 PPP6CO00743 305 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 CTSLP07711 333 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ACP5P13686 325 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 HMOX2P30519 316 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 CRHR1P34998 444 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 THOP1P52888 689 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ELAVL3Q14576 367 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 IMPG1Q17R60 797 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 TDRPQ86YL5 185 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF557Q8N988 423 aaPredicted RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 GATA6Q92908 595 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ALG14Q96F25 216 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 MKRN2Q9H000 416 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 EIF2B4Q9UI10 523 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 MID2Q9UJV3 735 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 MAFFQ9ULX9 164 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 MYOCOSA0A1B0GUC4 107 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 PRR5-ARHGAP8B1AHC4 643 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 AIM2O14862 343 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 TCEA3O75764 348 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 GRIA2P42262 883 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 HALP42357 657 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ARCN1P48444 511 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ARHGAP8P85298 464 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ADAM15Q13444 863 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 TTLL9Q3SXZ7 439 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 SLC44A4Q53GD3 710 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 MPP7Q5T2T1 576 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 RELL1Q8IUW5 271 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ULK2Q8IYT8 1036 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 AFAP1L2Q8N4X5 818 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 C2CD4AQ8NCU7 369 aaPredicted RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ZFAND2BQ8WV99 257 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 SCRN2Q96FV2 425 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 PANX3Q96QZ0 392 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 UBE2ZQ9H832 354 aaPredicted RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 PLAGL1Q9UM63 463 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 AK5Q9Y6K8 562 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 BDP1A6H8Y1 2624 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 TRPM6Q9BX84 2022 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 EDDM13A0A1B0GTR0 161 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 CACNG3O60359 315 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 EPOP01588 193 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 SERPINE1P05121 402 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 HNRNPA1L2Q32P51 320 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 FAM46CQ5VWP2 391 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 EID2BQ96D98 161 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 PTCD3Q96EY7 689 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 KCNA7Q96RP8 456 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 GPR22Q99680 433 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 FOXQ1Q9C009 403 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ACTR8Q9H981 624 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 NLE1Q9NVX2 485 aaPredicted RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 CHCHD3Q9NX63 227 aaKnown RBP15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF180Q9UJW8 692 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 ASF1AQ9Y294 204 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 NCKAP1Q9Y2A7 1128 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 OR51B4Q9Y5P0 310 aa15.66■□□□□ 0.1
PDGFB-201ENST00000331163 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.65■□□□□ 0.1
PDGFB-201ENST00000331163 MAGEA6P43360 314 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 TMEM198Q66K66 360 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 TTC23LQ6PF05 361 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 IYDQ6PHW0 289 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 HLA-CQ95604 372 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 HGH1Q9BTY7 390 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms