RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ZNF280AP59817 542 aaPredicted RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 SCAPQ12770 1279 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SELENBP1Q13228 472 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 GTF2H3Q13889 308 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SEMA3AQ14563 771 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 TRIP4Q15650 581 aaPredicted RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 NKG7Q16617 165 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 TTC23Q5W5X9 447 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 FRA10AC1Q70Z53 315 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 SYVN1Q86TM6 617 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 PLD3Q8IV08 490 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 TMEM199Q8N511 208 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 POC5Q8NA72 575 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 FKBP10Q96AY3 582 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 L3HYPDHQ96EM0 354 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 TINF2Q9BSI4 451 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 WDR12Q9GZL7 423 aaKnown RBP7.79□□□□□ -1.16
VMA21-201ENST00000330374 RASSF1Q9NS23 344 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ENPP5Q9UJA9 477 aa7.79□□□□□ -1.16
VMA21-201ENST00000330374 ZNF99A8MXY4 864 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 MYO1GB0I1T2 1018 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 UPK1AO00322 258 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SLC1A7O00341 560 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 GLP2RO95838 553 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 F9P00740 461 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 HCAR3P49019 387 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 EMX1Q04741 257 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 LCP2Q13094 533 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CTF1Q16619 201 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SMN1Q16637 294 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 COLEC12Q5KU26 742 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 KANK2Q63ZY3 851 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ANKS6Q68DC2 871 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 BTN2A1Q7KYR7 527 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CLHC1Q8NHS4 586 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SMIM14Q96QK8 99 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 USB1Q9BQ65 265 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 TDRD1Q9BXT4 1180 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 LRRC3Q9BY71 257 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 YTHDF1Q9BYJ9 559 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 EIF2B4Q9UI10 523 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 SLCO3A1Q9UIG8 710 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ZMYM5Q9UJ78 669 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CPNE3O75131 537 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 PRKD3O94806 890 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 DIRAS1O95057 198 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 UGT2B4P06133 528 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 FCGRTP55899 365 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 KCNC4Q03721 635 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 RCAN2Q14206 197 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SNX17Q15036 470 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SYT16Q17RD7 645 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 C18orf21Q32NC0 220 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 INTS6LQ5JSJ4 861 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 MFSD4BQ5TF39 518 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 KIAA0408Q6ZU52 694 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 BNIPLQ7Z465 357 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CIR1Q86X95 450 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 SYTL1Q8IYJ3 562 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 BPIFB1Q8TDL5 484 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 STON2Q8WXE9 905 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 MBOAT4Q96T53 435 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SMOC2Q9H3U7 446 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CNGB3Q9NQW8 809 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.78□□□□□ -1.16
VMA21-201ENST00000330374 COMMD8Q9NX08 183 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 DNMT3BQ9UBC3 853 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 B3GNT3Q9Y2A9 372 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 POLR3HQ9Y535 204 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 A0A0U1RQS6 177 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 LOC100130705A0A1B0GUX0 176 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CCDC162PA2VCL2 907 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ARVCFO00192 962 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CD3EAPO15446 510 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 ECI2O75521 394 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 HMBSP08397 361 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 RAP2AP10114 183 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 UMPSP11172 480 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 G6PDP11413 515 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 GTF2E2P29084 291 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 HTR6P50406 440 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 TUBA3CQ13748 450 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 RBM48Q5RL73 367 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 SDHAF4Q5VUM1 108 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 IL27RAQ6UWB1 636 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 GCNT7Q6ZNI0 430 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 PLEKHG7Q6ZR37 379 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 TMEM179BQ7Z7N9 219 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 OR52B6Q8NGF0 335 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 LPPQ93052 612 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 NSMCE3Q96MG7 304 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SLX1AQ9BQ83 275 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 PAAF1Q9BRP4 392 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 C16orf70Q9BSU1 422 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ABCG8Q9H221 673 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 TPK1Q9H3S4 243 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SP110Q9HB58 689 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms