RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 IST1P53990 364 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 TPD52P55327 224 aaPredicted RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 HMGCS1Q01581 520 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 SMARCB1Q12824 385 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 PTGR1Q14914 329 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ABRAXAS2Q15018 415 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 SLC36A3Q495N2 470 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 XKR7Q5GH72 579 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 GOLGA7Q7Z5G4 137 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 PACRGLQ8N7B6 248 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 GAB3Q8WWW8 586 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 C12orf43Q96C57 262 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CDK5RAP1Q96SZ6 601 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ING2Q9H160 280 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ADNPQ9H2P0 1102 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CXorf21Q9HAI6 301 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ZNHIT2Q9UHR6 403 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM155AB1AL88 458 aaPredicted RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 H3BNC9 293 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 K7ERQ8 282 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 UGT1A1P22309 533 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 UGT1A4P22310 534 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 HRH2P25021 359 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CA8P35219 290 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 UGT1A3P35503 534 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 UGT1A5P35504 534 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CAPGP40121 348 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ZFP36L2P47974 494 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ADARP55265 1226 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CAP1Q01518 475 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 FOXM1Q08050 763 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 PLD1Q13393 1074 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 MRPL58Q14197 206 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 HID1Q8IV36 788 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ITFG1Q8TB96 612 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CD99L2Q8TCZ2 262 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 MIPOL1Q8TD10 442 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 ISOC1Q96CN7 298 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 LRRC3Q9BY71 257 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CLPBQ9H078 707 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 PKD2L2Q9NZM6 624 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 AFF4Q9UHB7 1163 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 PRRC2BQ5JSZ5 2229 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 A0A1W2PQ45 241 aaPredicted RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 A0A1W2PQY0 241 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 CR2P20023 1033 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 VARSP26640 1264 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 TUFMP49411 452 aaKnown RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 TUBA4AP68366 448 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 NOGQ13253 232 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 PMS2P3Q13401 168 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 GTF2H2Q13888 395 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 BTG3Q14201 252 aaPredicted RBP13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 GTF2H2CQ6P1K8 395 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 BDH2Q9BUT1 245 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 LATS2Q9NRM7 1088 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 KLQ9UEF7 1012 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 TCRBV5S2A0A599 114 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 GNGT2O14610 69 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 PRMT5O14744 637 aaPredicted RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 DFNA5O60443 496 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 RSL1D1O76021 490 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 STC2O76061 302 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 PRR35P0CG20 571 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 ELK4P28324 431 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 EEFSECP57772 596 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 ARF5P84085 180 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 C16orf72Q14CZ0 275 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 DTWD1Q8N5C7 304 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 NAT16Q8N8M0 369 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 OSCP1Q8WVF1 389 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 SNRNP27Q8WVK2 155 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 HSPBAP1Q96EW2 488 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 MRPL9Q9BYD2 267 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 RNF38Q9H0F5 515 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 TIMMDC1Q9NPL8 285 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 FARSBQ9NSD9 589 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 TRPM5Q9NZQ8 1165 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 RIMKLBQ9ULI2 386 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 A0A1B0GVM2 712 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 KANSL1LA0AUZ9 987 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 TYW5A2RUC4 315 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 C2orf78A6NCI8 922 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 TBL1XO60907 577 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 BMP10O95393 424 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 CLCN2P51788 898 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM189BP81408 668 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 LAPTM5Q13571 262 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 KCTD21Q4G0X4 260 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 PDCD4Q53EL6 469 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 CYBRD1Q53TN4 286 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 TMEM26Q6ZUK4 368 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 KCTD8Q6ZWB6 473 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 LRRC43Q8N309 656 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 KCNJ9Q92806 393 aa13.84□□□□□ -0.19
ATP2C1-201ENST00000328560 ZNF382Q96SR6 550 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms