RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ACSL1P33121 698 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NNMTP40261 264 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 AIF1P55008 147 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SMARCB1Q12824 385 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PCLAFQ15004 111 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 RIOX2Q8IUF8 465 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SPATA9Q9BWV2 254 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PPA2Q9H2U2 334 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 GULP1Q9UBP9 304 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF69Q9UC07 566 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 MID1O15344 667 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 TNNI3P19429 210 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NDST1P52848 882 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PPP5CP53041 499 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CYP4F8P98187 520 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CBLBQ13191 982 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NOMO1Q15155 1222 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ZPBP2Q6X784 338 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF598Q86UK7 904 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NAT8LQ8N9F0 302 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF416Q9BWM5 594 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 RBM22Q9NW64 420 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 TBC1D24Q9ULP9 559 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 BNIP3LO60238 219 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ITGA10O75578 1167 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 FGRP09769 529 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NKX2-5P52952 324 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 DDX39BQ13838 428 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 COL9A3Q14050 684 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CLCA4Q14CN2 919 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ARHGAP15Q53QZ3 475 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ANKRD22Q5VYY1 191 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CLEC6AQ6EIG7 209 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PNCKQ6P2M8 343 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 USP30Q70CQ3 517 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 GRAMD2AQ8IUY3 354 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF655Q8N720 491 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SNIP1Q8TAD8 396 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CCDC115Q96NT0 180 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 MRPL45Q9BRJ2 306 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CNPPD1Q9BV87 410 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 IDI2Q9BXS1 227 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 FANCFQ9NPI8 374 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 GPATCH2LQ9NWQ4 482 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CDC14AQ9UNH5 594 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 DLGAP1O14490 977 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SGTAO43765 313 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 RXRBP28702 533 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PKLRP30613 574 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ANKRD53Q8N9V6 530 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ANKMY1Q9P2S6 941 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 LCTP09848 1927 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 OR2B3O76000 313 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ELK4P28324 431 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 GPC1P35052 558 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SUPT20HL1Q3ZLR7 823 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJB8Q8NHS0 232 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 KREMEN1Q96MU8 473 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ADAM7Q9H2U9 754 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 POPDC2Q9HBU9 364 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TLR8Q9NR97 1041 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TRPM5Q9NZQ8 1165 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 BTRCQ9Y297 605 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 MRPS7Q9Y2R9 242 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 FAM234BA2RU67 622 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SERPIND1P05546 499 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 EPB42P16452 691 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 GOT1P17174 413 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 NFIAQ12857 509 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TEAD4Q15561 434 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SYT12Q8IV01 421 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ABCB9Q9NP78 766 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SNTG1Q9NSN8 517 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CKLFQ9UBR5 152 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 KANTRA0A1W2PQU2 76 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 FMO4P31512 558 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF81P51508 661 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 DCDC1P59894 354 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TCEAL1Q15170 157 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 KLHL22Q53GT1 634 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CHPFQ8IZ52 775 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 OR8K3Q8NH51 312 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CSGALNACT1Q8TDX6 532 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 C1QTNF1Q9BXJ1 281 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TMEM168Q9H0V1 697 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TP63Q9H3D4 680 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 RPF2Q9H7B2 306 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SLC39A1Q9NY26 324 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 VPS28Q9UK41 221 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 VWA8A3KMH1 1905 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 NT5C1B-RDH14C9J2C7 533 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 RAD17O75943 681 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 NCK1P16333 377 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 M6PRP20645 277 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 OPRL1P41146 370 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ABCG1P45844 678 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 PPP2R2BQ00005 443 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 STARD3Q14849 445 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms