RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 G6PDP11413 515 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 JAK1P23458 1154 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 PTPRNQ16849 979 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 LETMD1Q6P1Q0 360 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 CIR1Q86X95 450 aaPredicted RBP18.84■□□□□ 0.61
RTN4-201ENST00000317610 GPSM1Q86YR5 675 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 OR52B6Q8NGF0 335 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 SDCCAG3Q96C92 435 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 FUNDC2Q9BWH2 189 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 FBXO44Q9H4M3 255 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 ENPP5Q9UJA9 477 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 PCDHB8Q9UN66 801 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 CHD5Q8TDI0 1954 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 GPR182O15218 404 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 TBC1D4O60343 1298 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 ADAM23O75077 832 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 BCAS1O75363 584 aaPredicted RBP18.84■□□□□ 0.61
RTN4-201ENST00000317610 KATNA1O75449 491 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 PKMP14618 531 aaKnown RBP18.84■□□□□ 0.61
RTN4-201ENST00000317610 ITIH1P19827 911 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 EFEMP1Q12805 493 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 SPCS2Q15005 226 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 NKG7Q16617 165 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 DPY19L1Q2PZI1 675 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 CTU2Q2VPK5 515 aaKnown RBP18.84■□□□□ 0.61
RTN4-201ENST00000317610 SLC39A12Q504Y0 691 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 LAIR2Q6ISS4 152 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 NECAB2Q7Z6G3 386 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 FAM86B1Q8N7N1 296 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 ZNF555Q8NEP9 628 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 OR4K2Q8NGD2 314 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 OR52E4Q8NGH9 312 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 ESAMQ96AP7 390 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 MGME1Q9BQP7 344 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 SMURF2Q9HAU4 748 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 VPS9D1Q9Y2B5 631 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 WDR37Q9Y2I8 494 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 FAM92AA1XBS5 289 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 LSM1O15116 133 aaKnown RBP18.83■□□□□ 0.61
RTN4-201ENST00000317610 ALDH2P05091 517 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 CTSHP09668 335 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 NFKBIAP25963 317 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 MGAT3Q09327 533 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 MAP2K5Q13163 448 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 ITGADQ13349 1161 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 TAF1AQ15573 450 aaPredicted RBP18.83■□□□□ 0.61
RTN4-201ENST00000317610 SDHAF4Q5VUM1 108 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 ANKRD13BQ86YJ7 626 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 FAM126BQ8IXS8 530 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 PARP8Q8N3A8 854 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 TTC30BQ8N4P2 665 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 CD200R1Q8TD46 325 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 SH3YL1Q96HL8 342 aaPredicted RBP18.83■□□□□ 0.61
RTN4-201ENST00000317610 C8orf48Q96LL4 319 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 RBM4BQ9BQ04 359 aaKnown RBP18.83■□□□□ 0.61
RTN4-201ENST00000317610 RBM4Q9BWF3 364 aaKnown RBP18.83■□□□□ 0.61
RTN4-201ENST00000317610 CD274Q9NZQ7 290 aa18.83■□□□□ 0.61
RTN4-201ENST00000317610 TRMT6Q9UJA5 497 aaKnown RBP18.83■□□□□ 0.61
RTN4-201ENST00000317610 F8W810 466 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 MGEA5O60502 916 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 GMNNO75496 209 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 UGT2B4P06133 528 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 HTR1BP28222 390 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 OR1E1P30953 314 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 IDUAP35475 653 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 PIGAP37287 484 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 OPRL1P41146 370 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 HTR6P50406 440 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 CD47Q08722 323 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 MEP1AQ16819 746 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 CTSL3PQ5NE16 218 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 CRTC3Q6UUV7 619 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 ENPP6Q6UWR7 440 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 LINC00299Q6ZSB3 139 aa18.83■□□□□ 0.6
RTN4-201ENST00000317610 SIDT2Q8NBJ9 832 aaKnown RBP18.83■□□□□ 0.6
RTN4-201ENST00000317610 ZNF548Q8NEK5 533 aaPredicted RBP18.83■□□□□ 0.6
RTN4-201ENST00000317610 RPRD1AQ96P16 312 aaPredicted RBP18.83■□□□□ 0.6
RTN4-201ENST00000317610 PARK7Q99497 189 aaKnown RBP18.83■□□□□ 0.6
RTN4-201ENST00000317610 ABI2Q9NYB9 513 aaPredicted RBP18.83■□□□□ 0.6
RTN4-201ENST00000317610 DOCK3Q8IZD9 2030 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 KPNA4O00629 521 aaPredicted RBP18.82■□□□□ 0.6
RTN4-201ENST00000317610 IGLV3-27P01718 113 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 PCMT1P22061 227 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 GPR15P49685 360 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 DGKQP52824 942 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 IL2P60568 153 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 ZNF846Q147U1 533 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 OXA1LQ15070 435 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 IMPG1Q17R60 797 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 OR2T12Q8NG77 320 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 EEF1AKMT1Q8WVE0 214 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 LINGO1Q96FE5 620 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 CDK15Q96Q40 435 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 MROQ9BYG7 248 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 ARMC7Q9H6L4 198 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 IL37Q9NZH6 218 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 NUDT4Q9NZJ9 180 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 VAPAQ9P0L0 249 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 CLDN25C9JDP6 229 aa18.82■□□□□ 0.6
RTN4-201ENST00000317610 NIPSNAP2O75323 286 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms