RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 TIMM29Q9BSF4 260 aa8.93□□□□□ -0.98
PDE4D-201ENST00000309641 RRAGDQ9NQL2 400 aaPredicted RBP8.93□□□□□ -0.98
PDE4D-201ENST00000309641 FTSJ1Q9UET6 329 aa8.93□□□□□ -0.98
PDE4D-201ENST00000309641 RABGEF1Q9UJ41 708 aa8.93□□□□□ -0.98
PDE4D-201ENST00000309641 CFAP20Q9Y6A4 193 aaKnown RBP8.93□□□□□ -0.98
PDE4D-201ENST00000309641 TCRBV9S1A1TA0A576 114 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CPED1A4D0V7 1026 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 OR52A4PA6NMU1 304 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 KCNK5O95279 499 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 TRIM16O95361 564 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 LDOC1O95751 146 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 AHSGP02765 367 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ALPPL2P10696 532 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 OGNP20774 298 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CCR7P32248 378 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 AARS2Q5JTZ9 985 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PERM1Q5SV97 790 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 LYPLAL1Q5VWZ2 237 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 IYDQ6PHW0 289 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 OGFOD3Q6PK18 319 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 LVRNQ6Q4G3 990 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 SLCO6A1Q86UG4 719 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ZNF761Q86XN6 746 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CCNJLQ8IV13 435 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PALM2Q8IXS6 379 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 IFT20Q8IY31 132 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 FAM181AQ8N9Y4 354 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 C2CD4AQ8NCU7 369 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 OR2L2Q8NH16 312 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 HEXDCQ8WVB3 486 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 SLC30A3Q99726 388 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CCM2Q9BSQ5 444 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 DUSP23Q9BVJ7 150 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 NINJ2Q9NZG7 142 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ZNF624Q9P2J8 865 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 MED16Q9Y2X0 877 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 COL5A1P20908 1838 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 FRYQ5TBA9 3013 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PDZK1P1A8MUH7 402 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PPM1DO15297 605 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CSRP1P21291 193 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ACADVLP49748 655 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CLCNKAP51800 687 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 SIM1P81133 766 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 DMPKQ09013 629 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CUL1Q13616 776 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 BOP1Q14137 746 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 EFTUD2Q15029 972 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ERCC6LQ2NKX8 1250 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 INAVAQ3KP66 663 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 METRNLQ641Q3 311 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PTRHD1Q6GMV3 140 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 DUS1LQ6P1R4 473 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 C17orf82Q86X59 251 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 VRK3Q8IV63 474 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CNTN4Q8IWV2 1026 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 SDR16C5Q8N3Y7 309 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ARL14Q8N4G2 192 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 ACVR1CQ8NER5 493 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 TCF12Q99081 682 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 NDNQ99608 321 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 TTC1Q99614 292 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 NRTNQ99748 197 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 RTKNQ9BST9 563 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CDC42EP4Q9H3Q1 356 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 COG4Q9H9E3 785 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 SARS2Q9NP81 518 aaKnown RBP8.92□□□□□ -0.98
PDE4D-201ENST00000309641 PADI4Q9UM07 663 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 CDYLQ9Y232 598 aa8.92□□□□□ -0.98
PDE4D-201ENST00000309641 AKAP13Q12802 2813 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 EME2A4GXA9 379 aaPredicted RBP8.91□□□□□ -0.98
PDE4D-201ENST00000309641 TNFSF14O43557 240 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 AP2A2O94973 939 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 OR56A5P0C7T3 313 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 CKMT1AP12532 417 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 CEACAM1P13688 526 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 F3P13726 295 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 CKMT2P17540 419 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 PPARGP37231 505 aaPredicted RBP8.91□□□□□ -0.98
PDE4D-201ENST00000309641 SLC19A1P41440 591 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 DAB2P98082 770 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 TIAL1Q01085 375 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDE4D-201ENST00000309641 MGAT5Q09328 741 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 C14orf28Q4W4Y0 310 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 RBM20Q5T481 1227 aaKnown RBP8.91□□□□□ -0.98
PDE4D-201ENST00000309641 ABRAXAS1Q6UWZ7 409 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 SFRP1Q8N474 314 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 ARL10Q8N8L6 244 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 HM13Q8TCT9 377 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 FBF1Q8TES7 1133 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 ELMO1Q92556 727 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 ATXN7L3BQ96GX2 97 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 RMDN2Q96LZ7 410 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 FAM167BQ9BTA0 163 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 FOXP3Q9BZS1 431 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 WWP1Q9H0M0 922 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 OR52A5Q9H2C5 316 aa8.91□□□□□ -0.98
PDE4D-201ENST00000309641 SLC32A1Q9H598 525 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms