RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CTPS1P17812 591 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 NR6A1Q15406 480 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 KANK2Q63ZY3 851 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 BLOC1S3Q6QNY0 202 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 EPHX4Q8IUS5 362 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 BPIFB6Q8NFQ5 453 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 FUBP1Q96AE4 644 aaKnown RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 APOL5Q9BWW9 433 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 MICAL3Q7RTP6 2002 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 FFAR3O14843 346 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 GPR42O15529 346 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 ENO2P09104 434 aaPredicted RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 SLC6A4P31645 630 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 POLR2JP52435 117 aaKnown RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 SELENBP1Q13228 472 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 RAB39AQ14964 217 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 PRSS55Q6UWB4 352 aaPredicted RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 TFAP2CQ92754 450 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 ASB2Q96Q27 587 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 RNF38Q9H0F5 515 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 SDR39U1Q9NRG7 319 aaPredicted RBP13.28□□□□□ -0.28
CTDP1-202ENST00000299543 SEPT3Q9UH03 358 aa13.28□□□□□ -0.28
CTDP1-202ENST00000299543 BNIP3LO60238 219 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 GJB5O95377 273 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 SNAP29O95721 258 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 FGF4P08620 206 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 SLC26A3P40879 764 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 PSMD8P48556 350 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 IL2P60568 153 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 FPGSQ05932 587 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 TAF12Q16514 161 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 RFPL4BQ6ZWI9 263 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 DHRSXQ8N5I4 330 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.28
CTDP1-202ENST00000299543 ACTR3BQ9P1U1 418 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 ANAPC2Q9UJX6 822 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 ERGIC3Q9Y282 383 aa13.27□□□□□ -0.28
CTDP1-202ENST00000299543 MAGED1Q9Y5V3 778 aaPredicted RBP13.27□□□□□ -0.28
CTDP1-202ENST00000299543 SYCE1LA8MT33 242 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 OAZ2O95190 189 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 C1RP00736 705 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 MYCP01106 439 aaPredicted RBP13.27□□□□□ -0.29
CTDP1-202ENST00000299543 RHOCP08134 193 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 BMP2P12643 396 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 PKMP14618 531 aaKnown RBP13.27□□□□□ -0.29
CTDP1-202ENST00000299543 TPD52P55327 224 aaPredicted RBP13.27□□□□□ -0.29
CTDP1-202ENST00000299543 YBEYP58557 167 aaPredicted RBP13.27□□□□□ -0.29
CTDP1-202ENST00000299543 ATP6V0D1P61421 351 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 IFITM3Q01628 133 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 NRG1Q02297 640 aaPredicted RBP13.27□□□□□ -0.29
CTDP1-202ENST00000299543 SEMG2Q02383 582 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 ATP6AP1LQ52LC2 224 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
CTDP1-202ENST00000299543 GPRIN3Q6ZVF9 776 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 SLC24A5Q71RS6 500 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 ADGRG5Q8IZF4 528 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 CLEC4FQ8N1N0 589 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 ANKFN1Q8N957 763 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 OR2T11Q8NH01 316 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 TBCDQ9BTW9 1192 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 C9orf16Q9BUW7 83 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 HIPK3Q9H422 1215 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 SLC8A2Q9UPR5 921 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 RAI2Q9Y5P3 530 aa13.27□□□□□ -0.29
CTDP1-202ENST00000299543 A0A1W2PP18 115 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 SNAP91O60641 907 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 HTR6P50406 440 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 FKBP1BP68106 108 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 PHYKPLQ8IUZ5 450 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 MINDY1Q8N5J2 469 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 EGFL8Q99944 293 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 TM6SF2Q9BZW4 377 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 NANOGQ9H9S0 305 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF225Q9UK10 706 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 AGO1Q9UL18 857 aaKnown RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 GPR45Q9Y5Y3 372 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 LCHNA4D1U4 455 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 MOXD2PA6NHM9 499 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 AQP12BA6NM10 295 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 INSIG1O15503 277 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 BCL10O95999 233 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 LDLRP01130 860 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 CAPN1P07384 714 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 OR4D2P58180 307 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 CREB5Q02930 508 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 UBE2UQ5VVX9 321 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 AFTPHQ6ULP2 937 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF598Q86UK7 904 aaKnown RBP13.26□□□□□ -0.29
CTDP1-202ENST00000299543 AQP12AQ8IXF9 295 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 COLGALT2Q8IYK4 626 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
CTDP1-202ENST00000299543 FIG4Q92562 907 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms