RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ALG1LQ6GMV1 187 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 GTF2H2CQ6P1K8 395 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RBFAQ8N0V3 343 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 OR2AP1Q8NGE2 309 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 CD200R1Q8TD46 325 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 HHIPL1Q96JK4 782 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ATOH8Q96SQ7 321 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TRIM54Q9BYV2 358 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TUBB1Q9H4B7 451 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ELOVL6Q9H5J4 265 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SOX17Q9H6I2 414 aaPredicted RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 INTS10Q9NVR2 710 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 IL17CQ9P0M4 197 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RNF11Q9Y3C5 154 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PRKAB1Q9Y478 270 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 BACE2Q9Y5Z0 518 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ULK1O75385 1050 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PGLSO95336 258 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 MYOGP15173 224 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 HLA-FP30511 346 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 HK3P52790 923 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 DNAJB13P59910 316 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ERVPABLB-1P60509 514 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RPL26P61254 145 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 STARD3Q14849 445 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SF1Q15637 639 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SAMD4BQ5PRF9 694 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SERPINA13PQ6UXR4 307 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TMEM199Q8N511 208 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 GPR26Q8NDV2 337 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PNPT1Q8TCS8 783 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SELENOMQ8WWX9 145 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 BIRC8Q96P09 236 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 MYOCQ99972 504 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TRMOQ9BU70 441 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 BRD9Q9H8M2 597 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 COMMD8Q9NX08 183 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF490Q9ULM2 529 aaPredicted RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PRPF19Q9UMS4 504 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 COQ6Q9Y2Z9 468 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 U3KQV3 271 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 LOC730098B7Z3J9 87 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 NRG2O14511 850 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 SH3BP5O60239 455 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 WDR47O94967 919 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ABCB1P08183 1280 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 TYRP14679 529 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 POLR2EP19388 210 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 VIPR2P41587 438 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PPP3CCP48454 512 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 NFATC2Q13469 925 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 RAB33AQ14088 237 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 LETMD1Q6P1Q0 360 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 AAGABQ6PD74 315 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 GCNT7Q6ZNI0 430 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 USP45Q70EL2 814 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 UBE2R2Q712K3 238 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 CHST9Q7L1S5 443 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF784Q8NCA9 323 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 MAGEE2Q8TD90 523 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 MAELQ96JY0 434 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 EBPLQ9BY08 206 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 INTS7Q9NVH2 962 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 LHX3Q9UBR4 397 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 B4GALT6Q9UBX8 382 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 SLC8A2Q9UPR5 921 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ITM2BQ9Y287 266 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 HELZP42694 1942 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 A6NHS1 94 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 GRXCR1A8MXD5 290 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 E2F6O75461 281 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 CPSF4O95639 269 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ESR1P03372 595 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 F11P03951 625 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 NTRK1P04629 796 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 DGKAP23743 735 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 MAP4P27816 1152 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ADSLP30566 484 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ST8SIA6P61647 398 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ACVR1Q04771 509 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PIGGQ5H8A4 983 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 APLFQ8IW19 511 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF786Q8N393 782 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 GPR156Q8NFN8 814 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 POF1BQ8WVV4 589 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 AURKBQ96GD4 344 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 CEP295NLQ96MC4 621 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 MTERF1Q99551 399 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 TTLL2Q9BWV7 592 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 DPY30Q9C005 99 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PARVBQ9HBI1 364 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ZDHHC7Q9NXF8 308 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 GNPTGQ9UJJ9 305 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 INTS6Q9UL03 887 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PCDHGB4Q9UN71 923 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PCDHGB5Q9Y5G0 923 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PCDHGA7Q9Y5G6 932 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms