RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TBC1D17Q9HA65 648 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SAGE2PA6NJ88 616 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 OR2AG2A6NM03 316 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ASLP04424 464 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 MON1AQ86VX9 555 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 C7orf57Q8NEG2 295 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 PPTC7Q8NI37 304 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 LRRC20Q8TCA0 184 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 PFDN2Q9UHV9 154 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 KCNE2Q9Y6J6 123 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 C3P01024 1663 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 PRAMEF1O95521 474 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 OR2B6P58173 313 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 LRRC73Q5JTD7 316 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ZNF613Q6PF04 617 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 SVOPLQ8N434 492 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ZNF433Q8N7K0 673 aaPredicted RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 AKTIPQ9H8T0 292 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 SLC2A6Q9UGQ3 507 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 PRMT5O14744 637 aaPredicted RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 CLIC3O95833 236 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 RPLP2P05387 115 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 SLC25A24Q6NUK1 477 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 TEFMQ96QE5 360 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 NIFKQ9BYG3 293 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 MED28Q9H204 178 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 XPNPEP1Q9NQW7 623 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 DNAJC11Q9NVH1 559 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 FETUBQ9UGM5 382 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ZNF541Q9H0D2 1346 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 MON2Q7Z3U7 1717 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 NEDD8-MDP1E9PL57 170 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 IST1P53990 364 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ENPEPQ07075 957 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 MEIOBQ8N635 442 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 MRPL9Q9BYD2 267 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 MTIF3Q9H2K0 278 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 FBXW11Q9UKB1 542 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 SAP18O00422 153 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 TREHO43280 583 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 ANXA4P09525 319 aaPredicted RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 RPL3P39023 403 aaKnown RBP15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 CACNG1Q06432 222 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 NAE1Q13564 534 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 BTN2A1Q7KYR7 527 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 NSMCE3Q96MG7 304 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 GMEB1Q9Y692 573 aa15.15■□□□□ 0.02
SHROOM4-201ENST00000289292 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 ISM1B1AKI9 464 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 RAP2AP10114 183 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 CXCR2P25025 360 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 HOXD13P35453 343 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 RPIAP49247 311 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 HSPB3Q12988 150 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 DNASE1L3Q13609 305 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 FAM171BQ6P995 826 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 TMEM110Q86TL2 294 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 COLGALT2Q8IYK4 626 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 OR9I1Q8NGQ6 314 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 OR10G6Q8NH81 332 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 RAB2BQ8WUD1 216 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 POLR3BQ9NW08 1133 aaPredicted RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 CD36P16671 472 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PARP15Q460N3 678 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 SYPL2Q5VXT5 272 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 OR13C4Q8NGS5 318 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 SUSD6Q92537 303 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 ASB9Q96DX5 294 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 MOCOSQ96EN8 888 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 GIT1Q9Y2X7 761 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 ZNF780BQ9Y6R6 833 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 MYBPHLA2RUH7 354 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 AREL1O15033 823 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 DHFRP00374 187 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 C1RP00736 705 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 RPLP0P05388 317 aaKnown RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 IL7RP16871 459 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PSMA1P25786 263 aaKnown RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 TLX1P31314 330 aaPredicted RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 DGKEP52429 567 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 ZNF132P52740 706 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 LIN54Q6MZP7 749 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 TLL2Q9Y6L7 1015 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PRAMEF33A0A0G2JMD5 474 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 YJEFN3A6XGL0 299 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 FADS2P1A8MWK0 482 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 HCRTO43612 131 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PRAMEF10O60809 474 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 STK16O75716 305 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 NDST3O95803 873 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 GLUD2P49448 558 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 CCL23P55773 120 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 RAB25P57735 213 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms